Gene Tcr_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1811 
Symbol 
ID3761383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1987569 
End bp1988198 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID637786555 
Producthypothetical protein 
Protein accessionYP_392077 
Protein GI78486152 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000443893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAGGCT TGTCAGAAAT AGAGTTAGCA GGGATTGCAG GCGCATATTT TTTAGGGTCG 
CTGTCGTCAG CGATTATTGT CTGTCGTTTA ATGGGATTGG GCGATCCACG TCAGGAAGGG
TCGGGCAACC CTGGCGCGAC CAATGTTAAG CGGCTTTATG GCTCCAAGCC TGCGGCGATC
ACTTTGTTGG GCGATATGCT GAAAGGGGTT GTTCCGGTTG CGTTAGCGAA TATGGCAGGC
TGGTCGCCTT TGGCCATTAT TCTGGTTGGG TTTGCCAGTT TCATTGGTCA TCTTTACCCC
ATTTTCTTTG GCTTTCGTGG TGGCAAAGGG GTCGCCACTA TGTTGGGGGT GATGTTTGGG
TTGTCTTTGC CAATTGGTGC CGCCGTTGCC GGTACATGGT TGTTTGTGGC GAAGGTTCTT
AAAATTTCCT CTTTGTCGGC CTTAATCGCC ACGGCCTTGG CGCCGCTTTA CATTTATTTA
TTGGCCGACG GCAATATGGC TTGGGTGTCG GTGACGGCCA TCATGACTCT TATTTTGTTC
TGGCGTCATC GAAGTAACAT CGAGCGGCTG CTAAAAGGCG AAGAAGATTT GATTAAAAAA
CAACCGGGCG CTTCTGACCC AAAAGAATAA
 
Protein sequence
MIGLSEIELA GIAGAYFLGS LSSAIIVCRL MGLGDPRQEG SGNPGATNVK RLYGSKPAAI 
TLLGDMLKGV VPVALANMAG WSPLAIILVG FASFIGHLYP IFFGFRGGKG VATMLGVMFG
LSLPIGAAVA GTWLFVAKVL KISSLSALIA TALAPLYIYL LADGNMAWVS VTAIMTLILF
WRHRSNIERL LKGEEDLIKK QPGASDPKE