Gene Tcr_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1755 
Symbol 
ID3762017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1917205 
End bp1918389 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content47% 
IMG OID637786493 
Productaminotransferase, class I and II 
Protein accessionYP_392021 
Protein GI78486096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGAT TGTCTAATCG CGTTAATCGA GTCAAACCCT CTCTGACTTT AGTGATTTCT 
GCCAAAGCGG CAGAGCTGAA AAGAGCCGGA AAAGATATCA TCAGTTTAGG TGCCGGGGAG
CCTGATTTCG ACACCCCAGA TCACATCAAA GCGGCCGGTA TCAGCGCAAT TCAAAATGGA
CAGACTCGCT ACACCGCTGT CGATGGAACA CCCGAATTAA AAAGCGCCAT TATTGAAAAA
TTCAAGCGCG ATAACAATCT GACGTACGAA ATGGATCAGA TTCTGGTGTC CTCTGGTGGA
AAACAAAGCT TTTACAACTT ATGCCAGGGC TTGCTGAATG ATGGCGATGA AGTCGTTATT
CCTGCGCCTT ACTGGGTTTC TTACCCTGAC ATGGCGCTTC TAGCAGGCGG TAAGCCAATC
ATTATCGAAG CCGATATTGA GCAAGGGTTT AAAATCACCC CCGAACAATT AAAAGCGGCC
ATCACCCCTA AAACCAAAAT GGTTGTGATC AACAGTCCGT CTAACCCGAC AGGAGCTGTT
TACACGGCAA GTGAACTTAA AGCACTGGGA GAAGTGTTAC AACAACACCC TGACATCGTC
ATTGCCTCGG ACGATATGTA TGAACACATT CTGCTTGATG ACACGCCATT TACGAACATT
CTAGAAGTCT GCCCAGAGCT GACCGATAGA ACCGTGGTCA TGAATGGCGT CTCTAAAGCC
TATTCGATGA CGGGATGGCG TATTGGCTAT GCCGGTGGAC CAAAAGACCT GATCGCAGCG
ATGCGTAAAG TGCAGTCTCA AAGCACCTCG AACCCTTGTT CGATTTCACA AGCGGCCTCG
ACTGAAGCAT TGAATGGCCC ACAGGATTGC ATTGACACCA TGCTGACAGA ATTTAAAAAG
CGTCATGAGT TTGTTGTGGA GCGAATCAAC GAAATCCCAG GATTTAAATG CATTCCGGCC
GCGGGCGCTT TCTACGCCTT TATGGACGTA AAAGCTGCAA TGAAACAAAA AGGTTATCAA
ACCGATACGG ACTTTGCGAC AGCCATTTTA GAAGAAGTGG AAGTGGCTGC CGTCCCCGGC
TCTGGCTTTG GCGCCGAAGG GCATTTACGG ATTTCTTTCG CAACCAGCAT GGTCAATTTG
ATTAATGCCT TGGATCGCAT TGATAGCTTT ATGAAAGACG CCTAA
 
Protein sequence
MSRLSNRVNR VKPSLTLVIS AKAAELKRAG KDIISLGAGE PDFDTPDHIK AAGISAIQNG 
QTRYTAVDGT PELKSAIIEK FKRDNNLTYE MDQILVSSGG KQSFYNLCQG LLNDGDEVVI
PAPYWVSYPD MALLAGGKPI IIEADIEQGF KITPEQLKAA ITPKTKMVVI NSPSNPTGAV
YTASELKALG EVLQQHPDIV IASDDMYEHI LLDDTPFTNI LEVCPELTDR TVVMNGVSKA
YSMTGWRIGY AGGPKDLIAA MRKVQSQSTS NPCSISQAAS TEALNGPQDC IDTMLTEFKK
RHEFVVERIN EIPGFKCIPA AGAFYAFMDV KAAMKQKGYQ TDTDFATAIL EEVEVAAVPG
SGFGAEGHLR ISFATSMVNL INALDRIDSF MKDA