| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1725 |
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| Symbol | |
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| ID | 3761024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1885500 |
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| End bp | 1886897 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786463 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_391991 |
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| Protein GI | 78486066 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATTC GAGAAAGACT CAGAAAAGTT GAGCAACAAA GACATGTGGC TGAAAAGATT
GAGAAAAAAC AACAATCTTC CGATAGTCCG GTAGCCGAAG TCGATGCCAA ACCAGCCCAG
AATACGTCTT TTTTAGAGAT TAAGAACCGT TGCCAGAAAA AAGCCGCTGA AGACGATGCG
TTTTATGAAG CCGACAGTCA GGAAACGCGT AAGGAGCTAC GACCCAGACT GGAAGAGCTG
GTGCGCGAAG TGGCAAGCGA TATTGGGTAT CCATTAACGG ATATTGAAGT CCGACAACTC
AGTTTAGAAT TGTTGGATGA GATTTATGGA CTCGGACCGA TAGAGCCATT GATGGCCGAT
CCAAGTGTTT CCGATATTTT GATTAACGGT CATCAGCAAA TCTACGTTGA GCGTCGCGGC
AAACTTGAAT TGACCGATGT TTCTTTTATC AGTGAAGAGC ATTTACGTAA CAAAGTGGAT
CGAATGCTAT ACAGCACTGG GCGTCGTGTC GATGAATCGT CGCCATTAGT GGATGCTCGA
TTACCCGACG GTTCACGAAT TAACATTATT ATTCCCCCTT TAGCCGTGGA CGGTATCAGT
GTCTCCATTC GACGCTTTCC TGAACAGCAT CTGCGTCCGA AAGATATGAT TGCCTATGGT
TCAATGACTG AACAAATGTA TGAGTTTTTG AACTATGGGG TGAAGTCCGG ATTGAATATT
TTAGTGTGCG GGGGAACTGG TTCCGGTAAA ACCACCACGT TGAATATGTT GTCCGGCCTG
ATCCCAGAAG ATGAACGAGT GGTTACAATC GAAGACAGTG CGGAGTTAAG AATGCAGCAG
TCGCATGTGG TTCGATTAGA AACTCGGCCC GCCAATGCGG AAGGTCAAGG CGAGTTAACA
CAGCGCGAGC TGTTAAAAAA TGCTCTCAGA ATGCGCCCAG ACAGAATTAT TTTGGGAGAG
GTTCGTGGTG GTGAAGTATT AGATATGCTT CAAGCGATGA ATACCGGGCA TGATGGTTCT
TTAGCGACGT TACATGCTAA CAGTCCAAGA GACTGTATTT CGCGTTTAGA ATTGATGATT
AATTTATCGG GTGTTGATAT TCCAGCGGCG TCAATTCGTA AACAAATTGC CAGTGCAATT
GACATTATTA TTTACGTAAA CAGAGGCCGC GAAGGGAAAA GGCGTGTTGA GTCCATTACC
GAAGTGGTTG GTATCGAAGA AGAAAATGTG GTGTTGCAGG AAATTTATCG GTTCGATAAC
AAAATGGATG TGGCCACTGG GCGTCAATAT GGCGTTTTCA AATCGTCTGG GTTAAGACCC
AGTTGTGGTA AAAAATGTGA GTCCGCCGGT ATGGTGTTAC CTGAAGACCT GTTTAACTTT
GAAAAAGAGG TTTCTTAG
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| Protein sequence | MGIRERLRKV EQQRHVAEKI EKKQQSSDSP VAEVDAKPAQ NTSFLEIKNR CQKKAAEDDA
FYEADSQETR KELRPRLEEL VREVASDIGY PLTDIEVRQL SLELLDEIYG LGPIEPLMAD
PSVSDILING HQQIYVERRG KLELTDVSFI SEEHLRNKVD RMLYSTGRRV DESSPLVDAR
LPDGSRINII IPPLAVDGIS VSIRRFPEQH LRPKDMIAYG SMTEQMYEFL NYGVKSGLNI
LVCGGTGSGK TTTLNMLSGL IPEDERVVTI EDSAELRMQQ SHVVRLETRP ANAEGQGELT
QRELLKNALR MRPDRIILGE VRGGEVLDML QAMNTGHDGS LATLHANSPR DCISRLELMI
NLSGVDIPAA SIRKQIASAI DIIIYVNRGR EGKRRVESIT EVVGIEEENV VLQEIYRFDN
KMDVATGRQY GVFKSSGLRP SCGKKCESAG MVLPEDLFNF EKEVS
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