| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1661 |
|---|
| Symbol | |
|---|
| ID | 3760939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1814186 |
|---|
| End bp | 1814479 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637786398 |
|---|
| Product | integration host factor, alpha subunit |
|---|
| Protein accession | YP_391927 |
|---|
| Protein GI | 78486002 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTAA CGAAAGCAGA TATTGCAGAA ACTTTATCCG ACAAGTTTGG CTTTAATAAG
CGTGAATCAA AAGAATTAGT TGAGCAATTC TATGATGAGA TGTCTGAAGT TCTCGTCAAA
GGAGAGCAGA TTAAGCTTTC TGGTTTTGGA AATTTTGAAT TGAAAGATAA GAGTGCCCGT
CCAGGAAGAA ATCCTAGAAC GGGAGAAGAT GTTCCCATTT CTGCTCGAAG AGTGGTAACA
TTTAAACCTG GACAAAAACT ACGAGCTCAA ATTGATAACT ATGGTACAGC CTAA
|
|---|
| Protein sequence | MALTKADIAE TLSDKFGFNK RESKELVEQF YDEMSEVLVK GEQIKLSGFG NFELKDKSAR
PGRNPRTGED VPISARRVVT FKPGQKLRAQ IDNYGTA
|
|---|
| |