Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1650 |
Symbol | |
ID | 3760928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1803484 |
End bp | 1804260 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637786387 |
Product | hypothetical protein |
Protein accession | YP_391916 |
Protein GI | 78485991 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0492481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTTTT TAGTTTCTCC CGCTAAGGCG CTTGATGAGA CGCCCGCGCC GGAACAAATC GAAAAAACAT CGTTGGCCTT TGGCGACCAA GCCAAACAAT TGATGGATGA GCTTAAACAG CTTGGGCCAG TGGATGTTGC ACAGTTGATG CATTTAAGTG ACAAGTTGGC TGACTTGAAT TTTGAACGTT TTCAAGCGTG GCAATATCCT TTTGATGACA CACACTCAAA ACAAGCGGTG TTGTTGTTTA AAGGGGATGT TTATCAAGGT TTGGAAGCGA GCTCTTTAGC CGCTAAAGAA TTGAGCTATT TGCAAACCCA TTTACGTATT CTGTCTGGTT TGTATGGGCT ATTAAAGCCA TTGGATGGTA TTTTGCCTTA TCGTTTGGAA ATGGGGACGA AGTTTCAAAA TGCCAAAGGC AAAGATTTAT ATGCCTTTTG GGGAGAGCAA ATTACAGAGT TGCTGAATCA GCAGTTAGCA GAACAAGGTA GCCGTACTTT AATTAACTTA GCTTCCAATG AATACTTTAA AGCGGTTAAG AAACAGAAAT TGAATGCGGA CATTATCACG CCGCAGTTTA AAGATTGGAA AAATGGTCAA TATAAAATGA TCAGTTTTTA TGCCAAACGT GCACGCGGCT TAATGGCGCG TTACGCGGCC GTTAATCAAG TTGAACAGGT TGAAGATTTA AAATATTTTG ATTACGACGG CTATCAATTT GCACCGGATT TATCATCTGA AAAAGACTGG GTGTTTACCC GAAAGCAAGC TGATTAG
|
Protein sequence | MLFLVSPAKA LDETPAPEQI EKTSLAFGDQ AKQLMDELKQ LGPVDVAQLM HLSDKLADLN FERFQAWQYP FDDTHSKQAV LLFKGDVYQG LEASSLAAKE LSYLQTHLRI LSGLYGLLKP LDGILPYRLE MGTKFQNAKG KDLYAFWGEQ ITELLNQQLA EQGSRTLINL ASNEYFKAVK KQKLNADIIT PQFKDWKNGQ YKMISFYAKR ARGLMARYAA VNQVEQVEDL KYFDYDGYQF APDLSSEKDW VFTRKQAD
|
| |