Gene Tcr_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1650 
Symbol 
ID3760928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1803484 
End bp1804260 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content41% 
IMG OID637786387 
Producthypothetical protein 
Protein accessionYP_391916 
Protein GI78485991 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0492481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTT TAGTTTCTCC CGCTAAGGCG CTTGATGAGA CGCCCGCGCC GGAACAAATC 
GAAAAAACAT CGTTGGCCTT TGGCGACCAA GCCAAACAAT TGATGGATGA GCTTAAACAG
CTTGGGCCAG TGGATGTTGC ACAGTTGATG CATTTAAGTG ACAAGTTGGC TGACTTGAAT
TTTGAACGTT TTCAAGCGTG GCAATATCCT TTTGATGACA CACACTCAAA ACAAGCGGTG
TTGTTGTTTA AAGGGGATGT TTATCAAGGT TTGGAAGCGA GCTCTTTAGC CGCTAAAGAA
TTGAGCTATT TGCAAACCCA TTTACGTATT CTGTCTGGTT TGTATGGGCT ATTAAAGCCA
TTGGATGGTA TTTTGCCTTA TCGTTTGGAA ATGGGGACGA AGTTTCAAAA TGCCAAAGGC
AAAGATTTAT ATGCCTTTTG GGGAGAGCAA ATTACAGAGT TGCTGAATCA GCAGTTAGCA
GAACAAGGTA GCCGTACTTT AATTAACTTA GCTTCCAATG AATACTTTAA AGCGGTTAAG
AAACAGAAAT TGAATGCGGA CATTATCACG CCGCAGTTTA AAGATTGGAA AAATGGTCAA
TATAAAATGA TCAGTTTTTA TGCCAAACGT GCACGCGGCT TAATGGCGCG TTACGCGGCC
GTTAATCAAG TTGAACAGGT TGAAGATTTA AAATATTTTG ATTACGACGG CTATCAATTT
GCACCGGATT TATCATCTGA AAAAGACTGG GTGTTTACCC GAAAGCAAGC TGATTAG
 
Protein sequence
MLFLVSPAKA LDETPAPEQI EKTSLAFGDQ AKQLMDELKQ LGPVDVAQLM HLSDKLADLN 
FERFQAWQYP FDDTHSKQAV LLFKGDVYQG LEASSLAAKE LSYLQTHLRI LSGLYGLLKP
LDGILPYRLE MGTKFQNAKG KDLYAFWGEQ ITELLNQQLA EQGSRTLINL ASNEYFKAVK
KQKLNADIIT PQFKDWKNGQ YKMISFYAKR ARGLMARYAA VNQVEQVEDL KYFDYDGYQF
APDLSSEKDW VFTRKQAD