Gene Tcr_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1648 
Symbol 
ID3760926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1801702 
End bp1802355 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content37% 
IMG OID637786385 
Producthypothetical protein 
Protein accessionYP_391914 
Protein GI78485989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.840198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTA GAATCATTCC TAAAAACTAT CGAAACGTGA CGGGAATTCA TGCATCCGCC 
AAAGCCGAAG AGCAGGCTAT GTTTGAATCA ACTTTGGAAA GAGATTTTAT CATACTTCTT 
GAGTTCGATA ATTCCGTAAT CAGTTTTCAC GTCCAACCAG TCGAAATCAA ATGGGTTGAT 
CAAAACGGTA AGAACCGTTC TTACATTCCC GATGTTTTGT ATAAGCGTAA AACTCAAAAT 
GGCATTGAAG AAGTTTTGGT TGAAGTTAAA TACCGCTCTG ATCTCAAAGA AAATTGGGAT 
GAGTTAAAAC CCAAATTGAA AGCCGGTTTG CATTATGCCA AACAGCAAGA TTGGAGATTC 
AAAATTATGA CGGAAGTCGA AATTCGTACG ACTTTCTTAA AAAATGCTAA GTTTTTAATG 
TCTTTTATTC ACCGAGGTGC GGATCAAGAA GGTGATATGG AATTAATTGA TAATCGACTT 
AAAGACCTTA AAAAATCGAC ACCAAAAGAG TTATTGGACA AATTGGCTTA CAGCGAGTGG 
GATAAAGCTT CTTTGTTGCC TACGCTTTGG TATTTAGTAG GCACCGGACA AGTCTGTTGT 
GATCTTCATA AAGACCAACT CAATATGAAT ATCCCCATTT ACTGGAAACC ATAA
 
Protein sequence
MPVRIIPKNY RNVTGIHASA KAEEQAMFES TLERDFIILL EFDNSVISFH VQPVEIKWVD 
QNGKNRSYIP DVLYKRKTQN GIEEVLVEVK YRSDLKENWD ELKPKLKAGL HYAKQQDWRF 
KIMTEVEIRT TFLKNAKFLM SFIHRGADQE GDMELIDNRL KDLKKSTPKE LLDKLAYSEW 
DKASLLPTLW YLVGTGQVCC DLHKDQLNMN IPIYWKP