Gene Tcr_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1646 
Symbol 
ID3760924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1798926 
End bp1799828 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content40% 
IMG OID637786383 
ProductTniB 
Protein accessionYP_391912 
Protein GI78485987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG AACATCTAAC CCCTAAAACA CAAGAATTGC TTGAGTTGAA TAACGATGAA 
CGGATTAAGG TTATTCGCTC ATCTCGTTGG GTTGGGTATC CTAGAGCCAA GCAAGTTTTA
CATAAACTTG AAGAGCTGTT TAATTACCCG AAAAATGACC GAATGCCGAA CCTGTTGATT
ATTGGGGATA CCAATAATGG TAAGACTGCT TTGGTTAAAC GTTTTTGTAA TATGCACCCT
GCTGAAGATA CCCCTGAAGG TGATGCGATT ATTTTTCCTG TTTTGTATAT TGAATGTCCC
CCTAAACCGG ATGAAGGTCG CTTGTATGAT GAAATTCTCG GCAAGCTTTA TCAGAAATTT
AAAGAACGTG ATAATGCTGG TAAGAAGCTT TCACAAGTGT TAAAGGTGTG TGAAAAAATT
GGCGTTAGGA TGATTATCCT TGACGAGGTG CAACATATTC TTGCCGGAAG TGGTCATCAA
CAGCGTTTGT TTTTAAATGT TATTAAAACG CTAGGTAACA AATTGAAAGT TCCGATTGTC
GCAGTTGGTA TCAGGGAGGC CTACAATGCT ATTCAGGCTG ATGCACAATT AGCTAACAGG
TTTGAATTAG CACCTCTGCC AAGATGGAGA TTAGGTGATG AAGATTATGA AAGGTTGTTG
GCCAGCTTTG AGGCATTATT GCCGTTAAGA GAGTCTTCCT CTCTCTACGA AAATCAGGTT
GCTAATAAGC TATTTTCAAT GACTGAAGGT TATATTGGGG AGCTATCACG ATTACTGTCC
AAGGCCGCGG AAGGTGCTAT TCAAAATGGA GAAGAGCGAA TTACATTAAA TCTATTGAAT
AGTTTGGATT GGGTTGCACC ATCGGATCGA AAGCGTCAGA TGGATAAGAT ACTGGGAATT
TGA
 
Protein sequence
MSFEHLTPKT QELLELNNDE RIKVIRSSRW VGYPRAKQVL HKLEELFNYP KNDRMPNLLI 
IGDTNNGKTA LVKRFCNMHP AEDTPEGDAI IFPVLYIECP PKPDEGRLYD EILGKLYQKF
KERDNAGKKL SQVLKVCEKI GVRMIILDEV QHILAGSGHQ QRLFLNVIKT LGNKLKVPIV
AVGIREAYNA IQADAQLANR FELAPLPRWR LGDEDYERLL ASFEALLPLR ESSSLYENQV
ANKLFSMTEG YIGELSRLLS KAAEGAIQNG EERITLNLLN SLDWVAPSDR KRQMDKILGI