Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1640 |
Symbol | |
ID | 3761937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1792836 |
End bp | 1794491 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637786377 |
Product | hypothetical protein |
Protein accession | YP_391906 |
Protein GI | 78485981 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0369906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGAC AAATTTATTA CCAAAATGTT CCACCCATAA AAGAATTCCC GAATGGGAGC TGGACGATCA TCTGGCATGG AAAGGTATCT CGTAATCCGA ATATTCCTTC CGAACCACTC ATAGAATTGC ACCTTCGTTC AAAAGAAAAA GACGAAATTA TTGAAGTTGG TGTCGGTCAA CTTCCTATCC TTACAATTGG TGCCCATTTT CTTAACAAAA GACTAACAAC AGGTACTCCT GACAAAATTG AAAACCTTAT CCTTCCAGGC ATAAACATTT CACAAGAAAA CATCAAAGTT ATTACTGCAT GGGAAAAAAT TGAAGACGGA AAATACGCCA TCAACCCCAA CAGCATGAAA ATACCTTTTT CTGCTGCGAG TACAAAATGC TTAGCAATCA ATTACAACGA CGACCCATTT GGAATCGTTA TTCCCACATC GGAAATCGCT CGCTTTTACT TCTGTCAATC AACCGATTTA GCTCACAGTG CTTTTTGGGG TGAATACACA CATTCGTTGG ATCAAATCAT AAATTTAGAA AAATGCGGGT TTGATGAGGA AACTGATAGA GCAATTGTTC ACCTAAGACA ACATTTTTCC AATGACGATG CCTGGACAAT TGGGCGAATA TTGAACGATG AAATAGCTTT GCTTGGCATT CAGGAAATCC ATAACAGTTT ACTACGTGGT ATAGATACCG ACCATTCAGG AATCTTTAGT TGCGGCATAC CCTATGTCGG CATAACGCGT TGGATCGCTA AAGGCATCCA AATGGGAACA AATGAACACC CTAGATACCT AATCACTCAA CTTATCAAAT GCTCCCACCC TTTCCCATTT ACTCAATTGC AGGTTAGCCG AGACAACGAT GCAGGTCAAG CAGCCCCGGA GACAGACAAA TCACAAAATG AAAAAAAACC ATACAACCGA CCAAATAGGC AGAAAAAGAG CAACGAGGAA AGTAACCCAC TTAATAGTGA AAGTGAAACT CACAAAAACT TACCCATCTC AAACATCTTA AGCAGATCTG CACAGTTTGA TTTTATTGAA AACAAGGAAA TCATAAAACC AGAAAGCAAA GAATATAACG AATACAAATC CATGCCCGAC AAACCCAAAG CACCCGATGC TAAAGGAGCA GGTACCGGAC AAGGTGATTA CAGCCAGAAC TCAACTAATG AACAGGCCAA AGTTAAACGA AGAAATGGCG TCGGGGCGGA TTTAAGCATG TTAACCGAAG CCGTACAAAT TCTCAAAGAT GGAGGCATGG ATATCAAAAT AAGAATGACA TCAACACTGC CTTTAGCTTC ATCTCCGCAT CGACGACAAT GGGCATATTT GGATTCTGGA ACTCAAACTA AAAGAAATGT CATTGCTATC GATATTAAAC GTAATAGCAC ACATTATTGC TGGGTAGATA TTGAACAGCG TAGAAAAGGT GAGTGCGCGG TCGGATTGCT CAAATCTGAT AAGCCGATAG GTGATGAAGT ACTACTTACT ATTTTGAAGA ATTTATCGCG TTTGAAAGGA ATTTGGGGAG GTTCAAAAGG CAATGCAGTA TCAGACTTCA ATATTTATTA TAATAGAGTT CTACATACTT GGGATTCAGC TCCCATACTA GCCAAGATTA TTGAAACAAA AACACAGAAA ATATAG
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Protein sequence | MPRQIYYQNV PPIKEFPNGS WTIIWHGKVS RNPNIPSEPL IELHLRSKEK DEIIEVGVGQ LPILTIGAHF LNKRLTTGTP DKIENLILPG INISQENIKV ITAWEKIEDG KYAINPNSMK IPFSAASTKC LAINYNDDPF GIVIPTSEIA RFYFCQSTDL AHSAFWGEYT HSLDQIINLE KCGFDEETDR AIVHLRQHFS NDDAWTIGRI LNDEIALLGI QEIHNSLLRG IDTDHSGIFS CGIPYVGITR WIAKGIQMGT NEHPRYLITQ LIKCSHPFPF TQLQVSRDND AGQAAPETDK SQNEKKPYNR PNRQKKSNEE SNPLNSESET HKNLPISNIL SRSAQFDFIE NKEIIKPESK EYNEYKSMPD KPKAPDAKGA GTGQGDYSQN STNEQAKVKR RNGVGADLSM LTEAVQILKD GGMDIKIRMT STLPLASSPH RRQWAYLDSG TQTKRNVIAI DIKRNSTHYC WVDIEQRRKG ECAVGLLKSD KPIGDEVLLT ILKNLSRLKG IWGGSKGNAV SDFNIYYNRV LHTWDSAPIL AKIIETKTQK I
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