Gene Tcr_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1640 
Symbol 
ID3761937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1792836 
End bp1794491 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content40% 
IMG OID637786377 
Producthypothetical protein 
Protein accessionYP_391906 
Protein GI78485981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0369906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGAC AAATTTATTA CCAAAATGTT CCACCCATAA AAGAATTCCC GAATGGGAGC 
TGGACGATCA TCTGGCATGG AAAGGTATCT CGTAATCCGA ATATTCCTTC CGAACCACTC
ATAGAATTGC ACCTTCGTTC AAAAGAAAAA GACGAAATTA TTGAAGTTGG TGTCGGTCAA
CTTCCTATCC TTACAATTGG TGCCCATTTT CTTAACAAAA GACTAACAAC AGGTACTCCT
GACAAAATTG AAAACCTTAT CCTTCCAGGC ATAAACATTT CACAAGAAAA CATCAAAGTT
ATTACTGCAT GGGAAAAAAT TGAAGACGGA AAATACGCCA TCAACCCCAA CAGCATGAAA
ATACCTTTTT CTGCTGCGAG TACAAAATGC TTAGCAATCA ATTACAACGA CGACCCATTT
GGAATCGTTA TTCCCACATC GGAAATCGCT CGCTTTTACT TCTGTCAATC AACCGATTTA
GCTCACAGTG CTTTTTGGGG TGAATACACA CATTCGTTGG ATCAAATCAT AAATTTAGAA
AAATGCGGGT TTGATGAGGA AACTGATAGA GCAATTGTTC ACCTAAGACA ACATTTTTCC
AATGACGATG CCTGGACAAT TGGGCGAATA TTGAACGATG AAATAGCTTT GCTTGGCATT
CAGGAAATCC ATAACAGTTT ACTACGTGGT ATAGATACCG ACCATTCAGG AATCTTTAGT
TGCGGCATAC CCTATGTCGG CATAACGCGT TGGATCGCTA AAGGCATCCA AATGGGAACA
AATGAACACC CTAGATACCT AATCACTCAA CTTATCAAAT GCTCCCACCC TTTCCCATTT
ACTCAATTGC AGGTTAGCCG AGACAACGAT GCAGGTCAAG CAGCCCCGGA GACAGACAAA
TCACAAAATG AAAAAAAACC ATACAACCGA CCAAATAGGC AGAAAAAGAG CAACGAGGAA
AGTAACCCAC TTAATAGTGA AAGTGAAACT CACAAAAACT TACCCATCTC AAACATCTTA
AGCAGATCTG CACAGTTTGA TTTTATTGAA AACAAGGAAA TCATAAAACC AGAAAGCAAA
GAATATAACG AATACAAATC CATGCCCGAC AAACCCAAAG CACCCGATGC TAAAGGAGCA
GGTACCGGAC AAGGTGATTA CAGCCAGAAC TCAACTAATG AACAGGCCAA AGTTAAACGA
AGAAATGGCG TCGGGGCGGA TTTAAGCATG TTAACCGAAG CCGTACAAAT TCTCAAAGAT
GGAGGCATGG ATATCAAAAT AAGAATGACA TCAACACTGC CTTTAGCTTC ATCTCCGCAT
CGACGACAAT GGGCATATTT GGATTCTGGA ACTCAAACTA AAAGAAATGT CATTGCTATC
GATATTAAAC GTAATAGCAC ACATTATTGC TGGGTAGATA TTGAACAGCG TAGAAAAGGT
GAGTGCGCGG TCGGATTGCT CAAATCTGAT AAGCCGATAG GTGATGAAGT ACTACTTACT
ATTTTGAAGA ATTTATCGCG TTTGAAAGGA ATTTGGGGAG GTTCAAAAGG CAATGCAGTA
TCAGACTTCA ATATTTATTA TAATAGAGTT CTACATACTT GGGATTCAGC TCCCATACTA
GCCAAGATTA TTGAAACAAA AACACAGAAA ATATAG
 
Protein sequence
MPRQIYYQNV PPIKEFPNGS WTIIWHGKVS RNPNIPSEPL IELHLRSKEK DEIIEVGVGQ 
LPILTIGAHF LNKRLTTGTP DKIENLILPG INISQENIKV ITAWEKIEDG KYAINPNSMK
IPFSAASTKC LAINYNDDPF GIVIPTSEIA RFYFCQSTDL AHSAFWGEYT HSLDQIINLE
KCGFDEETDR AIVHLRQHFS NDDAWTIGRI LNDEIALLGI QEIHNSLLRG IDTDHSGIFS
CGIPYVGITR WIAKGIQMGT NEHPRYLITQ LIKCSHPFPF TQLQVSRDND AGQAAPETDK
SQNEKKPYNR PNRQKKSNEE SNPLNSESET HKNLPISNIL SRSAQFDFIE NKEIIKPESK
EYNEYKSMPD KPKAPDAKGA GTGQGDYSQN STNEQAKVKR RNGVGADLSM LTEAVQILKD
GGMDIKIRMT STLPLASSPH RRQWAYLDSG TQTKRNVIAI DIKRNSTHYC WVDIEQRRKG
ECAVGLLKSD KPIGDEVLLT ILKNLSRLKG IWGGSKGNAV SDFNIYYNRV LHTWDSAPIL
AKIIETKTQK I