Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1638 |
Symbol | |
ID | 3761935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1790981 |
End bp | 1791610 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637786375 |
Product | lipoate-protein ligase B |
Protein accession | YP_391904 |
Protein GI | 78485979 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00770043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCTTC AAGTCAAATA CCTAGGCTTA CAACCCTACG AGTCAACCTG GGAAGCGATG CAGCGCTTCA CGAATGAACG CACCGAGCAC ACGCCAGACG AACTCTGGGT GGTTGAACAC CCTCCTGTTT TTACACAAGG CCTAAACGGT CAAGCAAAAC ACCTTCAAGC CTTTGCGTTG GAACAAAACA TCCCCATTAT TCAAACGGAT CGAGGGGGAC AAGTGACCTA TCATGGTCCC GGTCAAATCA TTATCTATGT GCTACTCGAC TTAAAACGCG CTCAATTAGG GGTTCGCGAC TTAGTGCATC GAATGGAAAA AGCTATTATT GAATTTTTAT GCGATTTAAG TATTTCAGCC GACGCTCGAC CAGACGCTCC TGGGGTTTAT GTGGATGGTC AAAAAATCGC CTCTTTAGGA CTCAAAATTC GAAAACAAAA AAGCTATCAT GGCTTGGCTC TCAATTTTGA TATGGATTTA ACGCCTTTTA GCTGGATTAC GCCTTGCGGT TTAGAAGGCA TACAGATGAC ACAGGTCTCC CACTTTATCC AACAACCTGA TCAGCTCGCC AGCCAAACCG CATTAATTAA AGCATTGTGT CACCAATTAC AGCCGGAAAT CGATTCTTAA
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Protein sequence | MPLQVKYLGL QPYESTWEAM QRFTNERTEH TPDELWVVEH PPVFTQGLNG QAKHLQAFAL EQNIPIIQTD RGGQVTYHGP GQIIIYVLLD LKRAQLGVRD LVHRMEKAII EFLCDLSISA DARPDAPGVY VDGQKIASLG LKIRKQKSYH GLALNFDMDL TPFSWITPCG LEGIQMTQVS HFIQQPDQLA SQTALIKALC HQLQPEIDS
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