Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1626 |
Symbol | |
ID | 3761923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1778349 |
End bp | 1779245 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786363 |
Product | heat shock protein HtpX |
Protein accession | YP_391892 |
Protein GI | 78485967 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000267884 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAA TTGGTTTATT TTTATTAACA AACATCGCGG TTTTGGCTGT GGCCATGATT ACGATGAACC TTTTGGGTGT GGGCAGCTAC ATGCAAGGGA CCAGTCTTGA TTTAGGGAAC TTGTTTGCCT TTGCCGCAAT CATTGGTTTT GCCGGGTCTT TTGTTTCTCT TGCCATGTCT AAATGGCTGG CAAAAATGTC AGTGGGCGCC AAAGTGATTA AGGAGCCTCG TAATGCTGAC GAACAATGGT TGGTGGAAAC TGTGCGCCGT CAAGCAGAAA AAGCGGGCAT CGGCATGCCG GAAGTTGCAA TTTATGAAGG GGCCGAGCCG AATGCGTTTG CAACGGGGAT GACGAAAAAT TCGGCATTGG TCGCGGTGTC TACCGGTTTG TTACGTCACA TGCGTCAGAA CGAAGTTGAA GCTGTTCTAG GGCATGAAGT GGCTCATATC GCAAATGGTG ATATGGTGAC GATGGCGTTG TTACAAGGTG TTGTGAACAC ATTCGTTATT TTCTTTGCGA AGATTGTTGC CTATGTGGTG GATCGTGTTG TTTTGAAAAA CGAAAGCGAA GGGCACAGTA TCACCTTTAT CGTTGTTGAT ATTGTGGCGC AGATTTTATT CGGTATTTTG GCGAGTATGA TTACCATGTG GTTCTCGCGT AAACGTGAAT TTCATGCCGA TAATGGCGGT GCGTATCTGG CCGGTAAAGA AAATATGATT GCGGCATTAC AACGTTTGCA AACGATGCAG CCGGGTGAAC TGCCTGATCA AATGGCGGCC TTTGGGATTT CGGCAAGACC GTCTAATATT GGTGATCTTT TCCGTTCGCA TCCACCGCTG GAAAAGCGTA TTGAAGCGCT ACGTGCAACA ACGCAAGACC AACTTAAAGT TGCTTAA
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Protein sequence | MKRIGLFLLT NIAVLAVAMI TMNLLGVGSY MQGTSLDLGN LFAFAAIIGF AGSFVSLAMS KWLAKMSVGA KVIKEPRNAD EQWLVETVRR QAEKAGIGMP EVAIYEGAEP NAFATGMTKN SALVAVSTGL LRHMRQNEVE AVLGHEVAHI ANGDMVTMAL LQGVVNTFVI FFAKIVAYVV DRVVLKNESE GHSITFIVVD IVAQILFGIL ASMITMWFSR KREFHADNGG AYLAGKENMI AALQRLQTMQ PGELPDQMAA FGISARPSNI GDLFRSHPPL EKRIEALRAT TQDQLKVA
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