Gene Tcr_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1601 
Symbol 
ID3760861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1752299 
End bp1753366 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content46% 
IMG OID637786338 
Productglycosyl transferase, group 1 
Protein accessionYP_391867 
Protein GI78485942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATA AACTTTATCA AAATACTCAG CAGGAAAACT GGTTAGACAC CAAAGGTATT 
CAACGACTCA CACTGGTTTC GGATGCGTGG CGACCGCAGG TGAATGGTGT GGTCACCACG
CTAACGCAAC TTGTTCAACA ACTGCAAAAG GCGGGGATTG AGGTTGATGT CATTCACCCA
AATGATTACA CAACAATTCC CTTACCAACC TATCCCGAAA TTCCTTTTGT ATGGCGAGCA
GACGGTTTGG AAAAACGAAT TACTGGCTTT AATCCCGATG CAATCCATAT CGCAACCGAA
GGGGCTTTAG GCTGGAAAGC CAGGCGCATC GCCTTAAGAC ACCGTTTACC TTTTACAACG
GCCTACCACA CCAAGTATCC GGAATATATC CACAAACGCT TTCCCATCCC AACACGCTGG
GTATATCATA TTTTAAAACG ATTTCATCGA CCGGCTTATA ACACGTTTGT GCCCGCCCCC
TCGATCTTGA CCGAGCTGAA AACAAAAGGA TTTCCCCATC TTGTCTTAAT GACACGCGGA
GTCGATACTG AACTGTTCAA CCCAAGTCGA GCCCATAACC TGGCGCAGCA AAAACCTTGT
TACTTATATG TAGGGCGCGT GGCGCCGGAA AAAAACATCA CGGCTTTTTT AGACCTTCAA
CTTCCTGGAC AAAAAATTGT GGTAGGAAAA GGACCCGATC TTGAGAACCT GAAGGCGGCA
TACCCTGATG TGGATTTCGT CGGCCCTAAG GCCGGAATCG AACTGGCAGA ATATTATGCC
AATGCCAATG TGTTTGTTTT CCCTTCTTTA ACGGACACCT TCGGCGTGGT TAACTTAGAA
GCCATTGCCT CAGGAACCCC TGTGGCAGCT TTTCCAGTCA CGGGTCCGAA AGATATCATT
ACTCAAGGTG TCAACGGAAT TTTGGATCAC AATTTGAAAA CCGCCATTGA AAAAGCGAGT
TTATTGAAGG CTCCTCATAG CATTGCCAAT TCCATTCCCG ACTATACCTG GCAAGCGGCA
GCACAACAGT TTCTGAATCA CTTGGCCATC ACTCCTAAAT CGACTTAA
 
Protein sequence
MTNKLYQNTQ QENWLDTKGI QRLTLVSDAW RPQVNGVVTT LTQLVQQLQK AGIEVDVIHP 
NDYTTIPLPT YPEIPFVWRA DGLEKRITGF NPDAIHIATE GALGWKARRI ALRHRLPFTT
AYHTKYPEYI HKRFPIPTRW VYHILKRFHR PAYNTFVPAP SILTELKTKG FPHLVLMTRG
VDTELFNPSR AHNLAQQKPC YLYVGRVAPE KNITAFLDLQ LPGQKIVVGK GPDLENLKAA
YPDVDFVGPK AGIELAEYYA NANVFVFPSL TDTFGVVNLE AIASGTPVAA FPVTGPKDII
TQGVNGILDH NLKTAIEKAS LLKAPHSIAN SIPDYTWQAA AQQFLNHLAI TPKST