Gene Tcr_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1589 
Symbol 
ID3760849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1738119 
End bp1739345 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content42% 
IMG OID637786326 
Productaspartate kinase 
Protein accessionYP_391855 
Protein GI78485930 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000253157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA TTGTTCAAAA ATATGGCGGT ACCTCAGTCG GTAACGTCGA GCGCATCCAA 
AATGTCGCCG ATAAGGTCGC AAAATTTATA GATGAAGGGC ATCAGGTTGT CGTTACTCTG
TCTGCAATGA GTGGTGAAAC GAATCGTTTG ACCGCGCTTG CAAAAGAAGT TCAGGAACAA
CCTTCACGTC GTGAGATGGA TGTGTTGTTA ACTACGGGTG AGCAAGTAAC GATTGCATTG
TTAAGTATGG CATTGCAACA AAAAGGTTAT GACTCCATCT CTTATACCGG GTGGCAGGTT
CCAATCAAAA CCAATGATAT TCACTCCAAA GCACGAATTG AAGAAATTGA TTCCGATAAA
ATTCGAAATC AACTTGATCA AGGAAAAGTT GTTGTGGTTG CTGGATTTCA AGGCGTAACA
CCGGAAGGGG ATATCACCAC ACTGGGTCGG GGAGGGTCCG ATACAACGGC AGTTGCCTTA
GCCGCGGCGC TAAAAGCCGA TGAATGCCAA ATTTATACCG ATGTGGATGG TGTTTATACA
ACCGATCCTC GTGTTGTGCC GGAAGCCAAA CGATTAGACG TAGTGACATT TGATGAAATG
CTTGAGCTTG CAAGCTTAGG AGCCAAGGTG CTGCAAATTC GTTCCGTTGA GTTTGCCAGT
AAATATAAAG TGCCTTTACG AGTACTTTCA TCAATGAAAG AAGGGGGTGG GACGCTTCTC
ATCTCAGAAG AAGATTTTGA GGATTTAGAC ATGGAAAAGC CATTGATTTC AGGTATTGCA
TTTAGCCGTG ATGAAGCGAA GCTAATGATT TTGGGCGTGC CCGATAAGCC GGGAGTGGCT
TATCAAATTC TAGGACCAAT TTCAGATGCG AATATTGAAA TTGATATGAT TATTCAAAAC
CAAAGTGTTG ATGGCACCAC TGATTTTACG TTTACTGTTG CTCGTGGAGA TTTACACGCG
GCCCAGAAAA TTCTGGAAAA AACCGCTGAA TCATTAGGTG CAAGAGAAGT GATTTGCGAT
GACACGATCG TTAAAATTTC GATGGTGGGT GTTGGTATGA AATCGCATTC CGGTATTGCC
AGTACCATGT TCAAAACATT GGCAGATCAT AATATTAACA TTCAAATGAT TGGTACTACG
GAAATCAAAA TCTCAGTAGT GATTGAAGAA TCGTATTTGG AAGAAGCGGT TCAAGCACTT
CATGCTGCAT TTGAATTAGA TAAATAA
 
Protein sequence
MALIVQKYGG TSVGNVERIQ NVADKVAKFI DEGHQVVVTL SAMSGETNRL TALAKEVQEQ 
PSRREMDVLL TTGEQVTIAL LSMALQQKGY DSISYTGWQV PIKTNDIHSK ARIEEIDSDK
IRNQLDQGKV VVVAGFQGVT PEGDITTLGR GGSDTTAVAL AAALKADECQ IYTDVDGVYT
TDPRVVPEAK RLDVVTFDEM LELASLGAKV LQIRSVEFAS KYKVPLRVLS SMKEGGGTLL
ISEEDFEDLD MEKPLISGIA FSRDEAKLMI LGVPDKPGVA YQILGPISDA NIEIDMIIQN
QSVDGTTDFT FTVARGDLHA AQKILEKTAE SLGAREVICD DTIVKISMVG VGMKSHSGIA
STMFKTLADH NINIQMIGTT EIKISVVIEE SYLEEAVQAL HAAFELDK