| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1582 |
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| Symbol | |
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| ID | 3760841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1731162 |
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| End bp | 1732319 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786318 |
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| Product | 3'-5' exonuclease |
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| Protein accession | YP_391848 |
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| Protein GI | 78485923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTATA AAATAATTAA CCAACAAGCC GATTTAGACG CCTTTTGCGA GCTTCTTAAA
ACTTGCCCTT GGATAGCACT CGATACAGAA TTTGTTCGAA CAGATACTTA TTTTTCGATT
CTCAGTTTAA TTCAAATTCA GACTCACGAC GGTCAAGCGG CGATCATTGA CCCGTTGGCA
ATCGAAGACT TAACGGCTTT ATGGTCGATT ATTAGCAACC CGAATGTGCG AAAAGTCTTC
CATTCAGCGC GCCAAGACAT TGAAGTATTG TACCAAGTCT CTGGTCAAAT GCCGATTTCA
ATTTATGACA CCCAAATTGC CTGTTTATTC TTACAACATG GTGATTTAGC AGGTCTGGCC
AGAGTGGTCA AAGCCGAACT CAATTTTACT TTAGAAAAAG ACCAGACACG AACCAACTGG
CAACAGCGCC CTCTCACCGA CAAGCAATTA GAATACGCCA TCAATGATGT CCGTTATTTG
GCCCCCCTTT ACGAAAAGCT GCAAGCTGAA TTAACAGAAC AGCAACAGGC CGCTTTGGAA
GAAGACTTCC AAGCTCTTTT GAATGAAGAT TTATATAAAA TCGACATCAA AGCGGCTGGT
AAAAAAATCA AAGCGGCCAA AAAACTTTCT CGTAAAAATA AAGCGATTGC ATACAAGTTA
GCGGAATGGC GTGAGCAGTT TGCGATTGAA AACAACAAAC CAAAACGTTG GGTCATGTCC
GATGAGGTAT TGGTCGCCAT TGCAAAACGT CCTCCAAAAA CACCCGAGGC ACTTTACAAA
GTGCCCCACA TCAAAGCATC TTCGGTAAAA AATTACGGTG CGGAATGGAT TGAGTTAATC
GACGACGTGT TTGAGTCCCC TGATGATTGG CCAAAACCAA CGGCCTCATC TATGCCGGCC
ACACCACAAG ATGAGGTATT AATCTCCATC GGCTTCGCTC TTATTCAACA GATCACCATT
GATTACAATG TGAACCCAAA CAATGTCGCC AACAAATCGG ATCTTTTAAA AATGATTCAA
TCGGATTCGT TCATGTTAAG AGGATGGCGC GGCTTGTTAC TGGGGCAACC CTTTACCCAG
TTTTTACAAA ATCAGATGCT TTTAAGCTGT GAGAACGGAA AGTTAGTTCA AAAAACTTTC
ACGCCAAACA CGCATTAA
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| Protein sequence | MDYKIINQQA DLDAFCELLK TCPWIALDTE FVRTDTYFSI LSLIQIQTHD GQAAIIDPLA
IEDLTALWSI ISNPNVRKVF HSARQDIEVL YQVSGQMPIS IYDTQIACLF LQHGDLAGLA
RVVKAELNFT LEKDQTRTNW QQRPLTDKQL EYAINDVRYL APLYEKLQAE LTEQQQAALE
EDFQALLNED LYKIDIKAAG KKIKAAKKLS RKNKAIAYKL AEWREQFAIE NNKPKRWVMS
DEVLVAIAKR PPKTPEALYK VPHIKASSVK NYGAEWIELI DDVFESPDDW PKPTASSMPA
TPQDEVLISI GFALIQQITI DYNVNPNNVA NKSDLLKMIQ SDSFMLRGWR GLLLGQPFTQ
FLQNQMLLSC ENGKLVQKTF TPNTH
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