Gene Tcr_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1576 
Symbol 
ID3760835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1724518 
End bp1726032 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content42% 
IMG OID637786312 
ProductBilirubin oxidase 
Protein accessionYP_391842 
Protein GI78485917 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC GTCAATTTAT ACAAAAAAGC TTAATTGGAC TGACTCTCCT TCCTCATGCA 
GGCAATGCGA TGGGAACATT GTTAGGGGGC GTCGGACAAG ATGATTTTAC CCACCCTATT
TTTCCTAAAG TGGATTTTTA CGTTCCTGAC TTAGAACAAG GTCAAAACCT TAATGGACAA
CAACACTTCA AATTAACGCT ACAAGAAGGA AAAACAAAAA TCCTACCAGA TGTCACGACC
CAGACAATCG GTATTAATCA AAGTTTTTTA GGCCCCGTCA TTCGGGTCAA AAAAGGTCAA
AAACTTCGAA TGGAAGTTAC AAATCAGCTA AATGAAGTTG CGGCACTCCA CTGGCATGGC
ATGATTTTGC CTGCAACAGA AGATGGAGGA CCTCACCAAC CGATTTCTCC TGGAAAAACC
TGGGTAGCTG AATGGGATGT TATTAACGAA CCTTCAACTT TATTTTATCA TTCACATACG
CACCAACATA CCGGCTCACA GGTTTGGCGT GGTCTCGGTG GACAGATGCA AGTGGTTGAT
GAAGAACGAG ATGCCGAACT TGGACTGCCC CATGAATATG GAGTGGATGA TTTTCCTGTT
ATTCTCATGG ATCGTGCTTT TGATGAAACC GGAGAATTTA TCTACAGCAA TGAACGGATG
AACAAAATGC AAGGCATGCA CGGCGATACA ATACTGGTGA ATGGCCGAGC TAACTCCGTT
TTGCACCCTC AGAAAGATCG CATTCGTTTA CGGCTACACA ATGCCTCCAA TGCACGTTTT
TATGATTTGG TGTTTTCAGA CAAACGCTCT TTTCAAGTCA TTGCAGGAGA CGGCGGTTTA
TTAGCCAAGC CACAGACACT AAACCGTATT CGATTATCGC CAGCAGAACG AGTTGAAATT
TTGGTTGATC TTTCCGATCA CCAACCTATT TCATTGCAAA CTTTAGCTGG TTATGGAAAC
TTATCGATGG GGATGGGCGG CATGATGAGA GATACATCAA AGCTTGATAA AGACTATGAT
TTATTTCACA TTGATTCTAG AAAATCAGAA ACCACTAAAC AATTTTTAAT TGACCATTTA
ACCCCTTTAC CGGATTGGTC AAATGTCAAT ATAGCGCAAA CGCGAACCAT GAATTTAGAA
ATGCAAATGG GACCTACCAT GATGTTTGGT TCAGGAGGGT TCACCATCAA TGGGCAAGCC
ATGCAAATGA ACGTGATAAA TGAACACTTA ACAGCCAATA GTTTTGAAAT ATGGCACCTT
AAAAACCCAT CAATGATGCA TCACCCTTTT CACATTCATA ACACTCAATT CAAAGTCTTG
GATCGAAATG GCCGAACGCC CTACCCATGG GAGCAAGGGT TAAAGGATAC TGTGATTGTT
CATCGCGATG AAACAGTTCG CATATTGTTA CCGACAGGCC CTTATCATAA CAATCAAGAA
CCGTATATGT ACCACTGTCA TATCTTAGAG CATGAAGATG CGGGAATGAT GGGACAATTT
ATCGTAACAA CTTAA
 
Protein sequence
MKRRQFIQKS LIGLTLLPHA GNAMGTLLGG VGQDDFTHPI FPKVDFYVPD LEQGQNLNGQ 
QHFKLTLQEG KTKILPDVTT QTIGINQSFL GPVIRVKKGQ KLRMEVTNQL NEVAALHWHG
MILPATEDGG PHQPISPGKT WVAEWDVINE PSTLFYHSHT HQHTGSQVWR GLGGQMQVVD
EERDAELGLP HEYGVDDFPV ILMDRAFDET GEFIYSNERM NKMQGMHGDT ILVNGRANSV
LHPQKDRIRL RLHNASNARF YDLVFSDKRS FQVIAGDGGL LAKPQTLNRI RLSPAERVEI
LVDLSDHQPI SLQTLAGYGN LSMGMGGMMR DTSKLDKDYD LFHIDSRKSE TTKQFLIDHL
TPLPDWSNVN IAQTRTMNLE MQMGPTMMFG SGGFTINGQA MQMNVINEHL TANSFEIWHL
KNPSMMHHPF HIHNTQFKVL DRNGRTPYPW EQGLKDTVIV HRDETVRILL PTGPYHNNQE
PYMYHCHILE HEDAGMMGQF IVTT