| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1557 |
|---|
| Symbol | |
|---|
| ID | 3760816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1705458 |
|---|
| End bp | 1706705 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637786293 |
|---|
| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
|---|
| Protein accession | YP_391823 |
|---|
| Protein GI | 78485898 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000280445 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA GCGCACATTC AAATTCTACT TTAGAGTCCA AAGTTTGGGA TGTCGTGGTT
GTCGGGGGCG GAATGGTTGG CGCCACAGTG GCGCTAGGGT TGGCTCAGAA AGGGTTCGAT
GTGTTGATGC TGGAGCGTCA ATCCCCTGAA TTGCATTGGG ATAAGAACTT ACCCATGCAA
ACACGGGTCA GTGCGTTAAC GCGTGCTTCC GAAAATATTT TGAAAAATCT GGGGGTCTGG
CAGGGAATTC AAAAGCGCCG TTATCATGCT TTTACAGACA TGCATGTTTG GGAGTCTATT
TCAGAGGCAC AGGTGCATTT TTCGTCTAAA GAAATTGATG AACCTAATTT GGGGTATGTG
GTTGAAAACC AAGTCATCCA AGCTGCGTTA TGGGAAGAGA TTATTCCTCA TGAAAAAGTT
CAGATTGCTG TGGGGCATGC TTTAACCGGT TTGGTGTTGC AGGCTGATCA CGCGTGTTTA
GAGTTGGATG GTTCGATTAA AGTAAGAGCT CGACTGGTTG TGGGAGCAGA TGGCGCCTTT
TCGAAAACGC GAGACATGGC TGGCATCGGT GTAGAAGAGC ATGATTATGA GCAATGTGCC
GTGGTGGGGT GTGTCAAAAC CCAATTACCT AATCAGGATA CTTGTTGGCA GCGTTATCAA
TCTGATGGCC CCTTTGCTTA TTTAGCCATG CAAGACAACT GGAGCTCGAT TGCCTGGTAC
TTGCCGACGG AAAAAATGCA ATGGGCGTTA TCGTTGTCGG ATGAGGCGTT TTCAGAAGCC
ATTACCGAGG CGTCGGCACA GAAATTAGGG CGAGTGAAGG AAGTGGCGGA GCGAACAGCT
TTTCCATTGG TTCGACGTCA TGCAGAACAT TATGTCAGGC CTCATTTTGC GTTGGTCGGG
GATGCAGCTC ATACCATCCA CCCACAAGCG GGTCAGGGGG TGAATCTCGG TTTACTTGAT
GCGGCTGCTT TGATCGAAAC TTTATCTCAA GCTCAAGAAG AATCGGGTAA AGACTGGAGT
CGCCTGAGTG TTCTGCGTCG TTATGAGCGC TGGCGTCGAG GCGATAATGC GATTGTGCAA
CGTTCAATGG AAGGTTTTGA TTGGCTTTTC AAACAAGAAA GGACGCTTAA AAACGAAATT
CGTAAACGAC TGTTGCCATT GGCTGATCAA GCGATCCCGA TTAAAAACTG GCTGATGAGT
CAAGCTCTGA AAGGTCGAGG GGTGTTACCG GAGTTAGCAC GATTATGA
|
|---|
| Protein sequence | MTDSAHSNST LESKVWDVVV VGGGMVGATV ALGLAQKGFD VLMLERQSPE LHWDKNLPMQ
TRVSALTRAS ENILKNLGVW QGIQKRRYHA FTDMHVWESI SEAQVHFSSK EIDEPNLGYV
VENQVIQAAL WEEIIPHEKV QIAVGHALTG LVLQADHACL ELDGSIKVRA RLVVGADGAF
SKTRDMAGIG VEEHDYEQCA VVGCVKTQLP NQDTCWQRYQ SDGPFAYLAM QDNWSSIAWY
LPTEKMQWAL SLSDEAFSEA ITEASAQKLG RVKEVAERTA FPLVRRHAEH YVRPHFALVG
DAAHTIHPQA GQGVNLGLLD AAALIETLSQ AQEESGKDWS RLSVLRRYER WRRGDNAIVQ
RSMEGFDWLF KQERTLKNEI RKRLLPLADQ AIPIKNWLMS QALKGRGVLP ELARL
|
|---|
| |