Gene Tcr_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1482 
Symbol 
ID3761604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1599784 
End bp1600455 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content42% 
IMG OID637786213 
Producthypothetical protein 
Protein accessionYP_391748 
Protein GI78485823 
COG category[S] Function unknown 
COG ID[COG3018] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AGACTTTATT ATTGACGGCA TTAACCAGTG CCTTTGTATT AGCCGGGTGT 
AGTTCACAGC CTGCTAAGAA TGAATATCAA TCAACACCGG AGCCTATGGC TAATAACCAA 
GCGCCGGCGA AGCAATCAAC GGTTGCTCCG ATTGCAGATT CAAAAGCAAC AGCCGAAGCT 
GAGAAAGTCG AAAAAGAGAC AACTCAATCA GACGCTGAGA AAGCACCAAA GGTTGTTTAT 
AAAGTACCTA AAAGTGCTCT TGAACCAAAG CTAATTAAGA TTTCTGGGAT TGGTTATGGT 
GCAGAAAGTA CTTTTGAAGG ATATACACCT GGTCAGCGTC GATTAATGGC GATTCGTTCA 
GCCAAACTGG ATGCCTATCG TTCGCTTGCT GAGCAACTTT ATGGAATTAA AATTGACAGT 
AATACCTCGG TTGCAACTCT CACTGCACAG AACGACAGCT TTAGAGCAAG AGTCAATGCG 
ATTGTTCGAG GCGCAAGAAT CGTGAGTATT ACGCCTATGG CGGATCATAA CTATGAAACA 
GTGTTGGAAG TATATGTCGA TAAAAGTTTC TTTAATAATG CATTCGTTTA TACTCATAAG 
TCCGAAGAAA CAACTATCTC CGCAGAAGAT TTATGTCGTA CTTTAGACTG TCAGTCCGTA 
GGAGATCGCT AA
 
Protein sequence
MNKQTLLLTA LTSAFVLAGC SSQPAKNEYQ STPEPMANNQ APAKQSTVAP IADSKATAEA 
EKVEKETTQS DAEKAPKVVY KVPKSALEPK LIKISGIGYG AESTFEGYTP GQRRLMAIRS 
AKLDAYRSLA EQLYGIKIDS NTSVATLTAQ NDSFRARVNA IVRGARIVSI TPMADHNYET 
VLEVYVDKSF FNNAFVYTHK SEETTISAED LCRTLDCQSV GDR