Gene Tcr_1477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1477 
Symbol 
ID3761957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1596846 
End bp1597583 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content41% 
IMG OID637786208 
Productflageller protein FlgA 
Protein accessionYP_391743 
Protein GI78485818 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACCCA TAAAACCGTA TATTCAACAC TTTTCTGCCG CTCTTTTTCT TCTGAGTGCT 
TTACTGCTCA ACAGTACCTG TGTGCAAGCT GAAAACCCAT CTCTCAATCC AGAGAGTCAA
CCGCTTGACA CCTTATACAA CATGGTACGA TCTCACCTAA AGCAAAAAAC TGACCAAAAA
GTTTATAACG CCCAAATTGA TATTCGAGAA TTCAGTCGGC GTTTACAACT CCCAAAGTGC
CAGGAAGCGT TGACTTTAGA AGATAAAGCA CCGGAAAAAC TTTATGGACG AATGACCTTA
CGCCTGGTTT GCCCATCGCC CGAGTGGAAA GTATACGTCA CAGCGCTGGT AGAAGGTGAT
GTGCCTGTTG TGGTTACCAC TAAAGCAATC TTGAAACAAG CCGTTATACA TAAAGAGGAT
GTGAAACAAA TATTGGTTCC GTATCAAAAA AGCAAAACGG GGGCTTTGAT AGACGTTGAC
AGCGCCATCG GGATGCGAGC TAAAAGAGGC TTGTCACCCA ATAGCATTTT AACGGTTAGG
CAATTACAAC CACCCTATTT AGTTCTTGAA GATAACAATG TCACCATTAT TACCTATATT
GGGAACATCA AAGTGAAGTC ATTAGGCAAG GCATTAGAAG ATGGCGTTAA AAACCAACAA
GTCCCAGTTG AAAACTTATC TTCTAAAAAA ATAATAAAAG GCATAGTTAT TGCTCCCAAT
ACGGTTCTCG TTCCTTAA
 
Protein sequence
MRPIKPYIQH FSAALFLLSA LLLNSTCVQA ENPSLNPESQ PLDTLYNMVR SHLKQKTDQK 
VYNAQIDIRE FSRRLQLPKC QEALTLEDKA PEKLYGRMTL RLVCPSPEWK VYVTALVEGD
VPVVVTTKAI LKQAVIHKED VKQILVPYQK SKTGALIDVD SAIGMRAKRG LSPNSILTVR
QLQPPYLVLE DNNVTIITYI GNIKVKSLGK ALEDGVKNQQ VPVENLSSKK IIKGIVIAPN
TVLVP