Gene Tcr_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1473 
Symbol 
ID3761953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1593108 
End bp1593518 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID637786204 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_391739 
Protein GI78485814 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGT TTCCAACACT GGATATTTCC GCAACCGGGA TGCACGCCCA AACCGTTCGA 
CTGAACACCA TCGCTTCTAA TATGGCGAAC GTTGACAGCA TCAGTTCGAA CTCGGATGAA
ACCTATCGCT CTAAGCAACC GGTCTTTAAA ACCATTATGG ATAATGAAAC CGGGCGTCCG
GCTGGAGGGG TGATGGTGGA TGATATTGTG GAAAGCAAGG CACCATTGAA AATGGAATAC
AACCCAAACC ACCCAATGGC GAACGCGGAA GGTTACATTT ATCGACCCAA TGTGAATGTG
GTAGAAGAGA TGGCTAACAT GATGAGTGCT TCTCGAAGCT ACGAAACCAA TATTGAAGTG
TTGAATACTT CAAAGCAATT ATTGTTACGC ACCATTCAGA TGGGTAAATA G
 
Protein sequence
MSMFPTLDIS ATGMHAQTVR LNTIASNMAN VDSISSNSDE TYRSKQPVFK TIMDNETGRP 
AGGVMVDDIV ESKAPLKMEY NPNHPMANAE GYIYRPNVNV VEEMANMMSA SRSYETNIEV
LNTSKQLLLR TIQMGK