Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1461 |
Symbol | |
ID | 3761941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1579623 |
End bp | 1580822 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786192 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_391727 |
Protein GI | 78485802 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGAAA CGACGTCTGA GTCTTATGAT GCCTTGTTGA ATTTTATTCG AAAGCATTAT GAAACGTTTT CGAAAGAAGA GGGGGTGATT CCATTGCACG CTCCTTGTTT TGATGAGGCT GAAAAATCAA CCGTAGTGAA TTGTATTGAC AGCACCTTTG TTTCTTCTGT TGGTCAGTAT GTCGAACAGT TTGAAAATGA TTTGGCTCAT TATACGGGAG CAAGTCATGC TGTAGCTGTA GTCAATGGCA CCATGGGGTT ATTTCTCGGT CTCAAAATAG TGGGTGTGCA AACAAACGAC TTGGTGTTAA CCCAGTCGTT GACGTTTGTG GCCACGCCTA ATGCCATCAA ACTTTGTCAG GCCGAGCCAT TATTCTTAGA TGTTTCTCGT AAAACGATGG GCTTATCGCC TGAAGCATTA CAGCATTTTC TAGAAACAGA AACGCACACG CATCAAGGCT ACTGTATTCA TACGCAAACT GGACGTCGAA TTTCAGCGTG TGTTCCCATG CATACGTTGG GGTTCCCATG TGAAATCGAT CGAATTGTTG AGGTGTGTCA TCAACATCAT ATTAAAGTGG TGGAAGATGC GGCTGAAAGT TTAGGCAGTT TTTATCGAAA CCAACATACC GGCACGTTTG GTGATGTGGG GGTGTTTAGC TTTAATGGTA ATAAAATTCT CACAACGGGC GGTGGGGGAA TGCTGGTAAC CAATAACGCT AAGCTTGCAG AGCATGCAAA GCATTTAAGC ACGACAGCCA AAAAACCTCA TGCTTGGTAT TTCGAACATG ATGAAGTGGC GTATAACTTA AGAATGCCGA ATCTCAATGC GGCCTTGGGT GTAGCTCAGC TTGGCAAGAT GAAGACCTTT TTGCAAGAAA AGCGTGCATT GGCGGAAGGC TATCAACAAA TCATTCAAAA TCAGCCAGGC CTGGCTGTTT TTAATGATGA CAACAATGAC AATATCGCGC AATCGAATTA CTGGCTGAAT GCCATTCTTT GTCAAAATGC TTCTGAAAGA GAAGTTTTTT TGGCGTTGAC GAATGAGCAG GGCATTCAAA CGCGTCCTTT ATGGACGCCC ATGCATCAAC TTGAGATTTA TCAACAGGCT TTGCGAGCAG AACTGCCTAA TACAGAATGG TTTGCTGAGA AAGTGGTGAA TTTGCCGAGT GGTATTCGCT GTGCAGGAGC GAAAAAATGA
|
Protein sequence | MSETTSESYD ALLNFIRKHY ETFSKEEGVI PLHAPCFDEA EKSTVVNCID STFVSSVGQY VEQFENDLAH YTGASHAVAV VNGTMGLFLG LKIVGVQTND LVLTQSLTFV ATPNAIKLCQ AEPLFLDVSR KTMGLSPEAL QHFLETETHT HQGYCIHTQT GRRISACVPM HTLGFPCEID RIVEVCHQHH IKVVEDAAES LGSFYRNQHT GTFGDVGVFS FNGNKILTTG GGGMLVTNNA KLAEHAKHLS TTAKKPHAWY FEHDEVAYNL RMPNLNAALG VAQLGKMKTF LQEKRALAEG YQQIIQNQPG LAVFNDDNND NIAQSNYWLN AILCQNASER EVFLALTNEQ GIQTRPLWTP MHQLEIYQQA LRAELPNTEW FAEKVVNLPS GIRCAGAKK
|
| |