Gene Tcr_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1422 
Symbol 
ID3761681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1535595 
End bp1536749 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content36% 
IMG OID637786155 
Producthypothetical protein 
Protein accessionYP_391690 
Protein GI78485765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACT ATCAAAACCC AAAAGAAGGG AAAACTTATA TTAGCCCAAG GTTAAAAGCC 
TTTGGTGATT CTGATAGAAA AGTCCGAATT GCATCAAAAG TAATAGAGTC ACCAGATTCT
TATGCTTTTG GAAAAATTAA AGACGAAGTT GTATTAAGGC ATAAGGAAGA TGCGAAATCC
CACATCACAG CAAAGTTCCT AGAAGATAAT AGAGGGATAT TCGTACTCAG CATTCAAGGC
TATAGCGTAG CAACAGAAAA ACCTCACAAC GCTAGTTTTT CTTTTGTAGG TGAAGAGATT
GGGAAGTTAC TCGAATTTAT TCGTAATATT CAATCAGTAA ACTTAGATAG CCCTTCAAGA
GTTAACATAA GCGATGAAGA GCTTAATCGT ATTGTCCTTT CGGATAAGCA AGCTAAAAGC
TTGCTTCATG AAAACCAAGA GCTTTTCGCT GAGGTTCTTA GGTCGGAAGT AACAACAGAA
GACCTTATTG CTGTCGGGTA CAGAAAAAAA CAATTAGAGG TTTATGAGAA GCTTTTAACC
AACCAATCCT ACTTCAATTC CATAAAAGAC AAGAAGAAGT GTACTAATGA AAGTCTTTGG
CAAAAATACT ATGAAAAAAA CCCTTGGATA TTTGGTTATG GTCTTGGATA TATTTTCTTA
TCTGGCCTGG ATGACAAAAA ATTAGAGCAA GTAGTTCAAG GACACAGCCT AGATTCACAT
GGTAAACGGG TTGATGCACT AATGAAGACA AAGGGGATTA TTTCTAATAT TTGCTTTGTA
GAGATAAAAA CCCATTTAAC TGATTTGCTA GATTCTAAAC CTTACAGATC AGGCTGTTGG
GCCCCTTCAA AAGAGTTGGT AGGAGCTATT TCTCAAGTAC AAGGTACAGT TGCATCTGCA
ATTGAAAATC TATCAATCAA GATAAACCCA ACTGATAAGG ACGGTAACCT AACAGGTGAA
GAGATATATA ATTATCAGCC TAAATCTTAC CTTGTTATAG GAAGTATGGC TGAGTTTGTT
TCAGAAAATG GCGTCAATAA AGACAAGCTG AGGTCTTTTG AATTACTGCG AAAAAATACC
ACAAATCCAG AAATCATTAC TTTTGACGAA TTATATGAAC GTGCAAAATT TATTGTTTAT
CACAATCAAA GCTAA
 
Protein sequence
MDDYQNPKEG KTYISPRLKA FGDSDRKVRI ASKVIESPDS YAFGKIKDEV VLRHKEDAKS 
HITAKFLEDN RGIFVLSIQG YSVATEKPHN ASFSFVGEEI GKLLEFIRNI QSVNLDSPSR
VNISDEELNR IVLSDKQAKS LLHENQELFA EVLRSEVTTE DLIAVGYRKK QLEVYEKLLT
NQSYFNSIKD KKKCTNESLW QKYYEKNPWI FGYGLGYIFL SGLDDKKLEQ VVQGHSLDSH
GKRVDALMKT KGIISNICFV EIKTHLTDLL DSKPYRSGCW APSKELVGAI SQVQGTVASA
IENLSIKINP TDKDGNLTGE EIYNYQPKSY LVIGSMAEFV SENGVNKDKL RSFELLRKNT
TNPEIITFDE LYERAKFIVY HNQS