Gene Tcr_1409 details

Gene Information

• Locus tag: Tcr_1409
• Symbol: smpB
• ID: 3760775
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 1520152
• End bp: 1520628
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637786143
• Product: SsrA-binding protein
• Protein accession: YP_391678
• Protein GI: 78485753
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 55
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGA AAAAAAAGCA AAACAATCCA AACAGTATCG CTCAAAATAA AAAAGCGCGT 
TTCGACTATT TTATTGAAGA AACCTTTGAA GCGGGCTTAG CGCTTGAAGG CTGGGAAGTC 
AAAAGTCTCC GCCAAGGAAA AGTGCAAATT AATGAAAGCT ATATTTTGCT TAAAAACAAC 
GAAGCCTGGC TTTTTGGCGC GCTGATTACC CCACTTATCA CAGCTTCAAC CCACTCCAAT 
CACGACCCGT TAAGGCTTAG AAAACTCCTG ATGCACCGAA GAGAAATCGA TCGTTTAATG 
GGGTTGGTCG ACCAAAAAGG CTTTACGGTG GTTCCATTAG GCCTTCATTG GAGCAAAGGA 
AAAGTCAAAA TTTCCATTGG CCTCGCAAAA GGTAAAAAAC TTCATGACAA ACGCGCGACT 
CAAAAAGAGC GTGATTGGAA CCGTGACAAA CAACGTATCA TGAAGTACCA CGCATAA 

 

Protein sequence

MAKKKKQNNP NSIAQNKKAR FDYFIEETFE AGLALEGWEV KSLRQGKVQI NESYILLKNN 
EAWLFGALIT PLITASTHSN HDPLRLRKLL MHRREIDRLM GLVDQKGFTV VPLGLHWSKG 
KVKISIGLAK GKKLHDKRAT QKERDWNRDK QRIMKYHA