Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1398 |
Symbol | |
ID | 3762034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1510883 |
End bp | 1512001 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637786132 |
Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
Protein accession | YP_391667 |
Protein GI | 78485742 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.384288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTAA ATACCATTGA AGAATTGATT GAAGATTATA AGCAGGGCAA GATGATCATC CTGATGGATG ATGAAGACCG TGAAAATGAA GGCGATTTAA TGATGCCTGC CAGTGCGGTG ACTGCAGATC AAATCAATTA TATGGCACGA TACGGGCGAG GCTTGATTTG TCTGACTTTG ACCAAAGAGC GTTGTCAGCA ACTGCATCTC CCGTTGATGA CACGAAATAA CCAAGATTCT CTCGGTACCA GCTTTACCGT TTCAATTGAA GCCGCAGAAG GGGTGACCAC TGGGATTTCG GCGGCCGATC GTGCTAAGAC CATTCAAGCC GCCATTCAAC CAGAGGCTCA GCCAGCGGAT ATTGTCACAC CGGGCCATGT GTTTCCAATT ATGGCGAAGC CAGGTGGTGT GTTGGAAAGA GCCGGGCATA CCGAAGCCGG GTGTGATTTA GCCCGTTTAG CAGGACTGGA ACCAGCGTCA GTAATTGTTG AGATTATGAA CGAAGATGGC ACGATGGCGC GTCGCGATGA TTTAGAGATT TTCGCCAAAG AACATGGCAT TAAGCTCGGA ACTGTAGCGG ATTTGATTGA ATATCGCTTA AAGAATGAAA AAACGATTGA ACGCGTTTCC GAATGTCATA TGCCAACAGA ATACGGAGAT TTCCGTTTGA TTGGTTATGA AGATGTTTTA GAACATCGAA CGCATTTAGC ATTGGTGCAT GGTCCATTAA AAAAAGATCA TCCGACTATG GTGCGTGTTC ATATGTTGGA TACGTTATGT GACTTGTTCG ATTCTCAAAG AGACGAATGT GGCTGGTCAT TACGTTGCGC CATGAAACAG ATTGCACAAG AAGAGTCTGG TGTTGTTGTG GTGTTGCGTA AACACGAAGA AGGCGCCGAG CTTCTGGATA AAATTCAACA GTTTCAAATG AAAGATCGAG GTATTTCCCA GCCTGAAATT CAAACAGAAG ATGATGCCAA AACGTATGGA TTAGGCGCTC AAATTTTATC TGATTTAGGG TTAACACAGC TGAAAGTCAT CGGTTCGGCA TGGAAGATGA GTGCGCTGGG TGGATTTGGC TTGGAAATTG TTGAAAATAT AGACAAACAA AAAGAATGA
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Protein sequence | MQLNTIEELI EDYKQGKMII LMDDEDRENE GDLMMPASAV TADQINYMAR YGRGLICLTL TKERCQQLHL PLMTRNNQDS LGTSFTVSIE AAEGVTTGIS AADRAKTIQA AIQPEAQPAD IVTPGHVFPI MAKPGGVLER AGHTEAGCDL ARLAGLEPAS VIVEIMNEDG TMARRDDLEI FAKEHGIKLG TVADLIEYRL KNEKTIERVS ECHMPTEYGD FRLIGYEDVL EHRTHLALVH GPLKKDHPTM VRVHMLDTLC DLFDSQRDEC GWSLRCAMKQ IAQEESGVVV VLRKHEEGAE LLDKIQQFQM KDRGISQPEI QTEDDAKTYG LGAQILSDLG LTQLKVIGSA WKMSALGGFG LEIVENIDKQ KE
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