Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1382 |
Symbol | |
ID | 3762018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1495619 |
End bp | 1496317 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637786116 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_391651 |
Protein GI | 78485726 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGG CAAAACCTAA AGTTCTATTG GCTGAAGATC ACGACTTGGT TCGAGCTGGA TTTAAATCCA TTTTAGATTC GGATGGTACC GTTAAGGTCA TCGCTGAAGC ACAAGATGGC GAAACCACCC TTTCATTAAT TGAAGAAAAA CAACCGGATA TTTTGATTAT TGATTTATCA ATGCCTAAAT TGAGTGGGTT GGCGGTGATT ACACAGCTTA AAAAGCAAAA AAATCCAATC AAGATCATTG TGTTAACGGC CGCAGAAGCA CCGAATGTCT GGAAGGAAGT GCTGGACTTA GGTGTTGAAG GGTTAGCGCT TAAGTCGGTT TCTAAAGCGG AACTGGTTTC AGGGATTAAG TCTGTGATTG CGGATGAGAA TTTCATTCAT TCTGAAATTC AACCGGCTCT GGATGCTTAT CTAGCGGAAC TGGAAGGGCA GAAAACACCG GAAGAAGATT CGGGAGATAA ACCAAGCCGA CCTAAGAAAC TTTCCGTACG TGAAAAGCAA GTGATTAAGT TGGTTGCAGA AGGGTATAAA ACCAAAGACA TTGCGGATAT GTTAGAAATC AGCGATCGTA CGGTCTCTAA GCACAGAGAA AATATTATGA CTAAACTGGG CATGACCGCA TCGGCCGAAT TGGTGAATTA CGCAAGCCAT ATTGGGTTGC TTAAAGTAGC CTTGGATGAA ATTCGTTAA
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Protein sequence | MAKAKPKVLL AEDHDLVRAG FKSILDSDGT VKVIAEAQDG ETTLSLIEEK QPDILIIDLS MPKLSGLAVI TQLKKQKNPI KIIVLTAAEA PNVWKEVLDL GVEGLALKSV SKAELVSGIK SVIADENFIH SEIQPALDAY LAELEGQKTP EEDSGDKPSR PKKLSVREKQ VIKLVAEGYK TKDIADMLEI SDRTVSKHRE NIMTKLGMTA SAELVNYASH IGLLKVALDE IR
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