Gene Tcr_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1338 
Symbol 
ID3760700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1453836 
End bp1454432 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content43% 
IMG OID637786070 
ProductXRE family transcriptional regulator 
Protein accessionYP_391607 
Protein GI78485682 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA AAGAACATCA AACTCTAGAC CTGCATATCG GAAAAATCAT CAACAACGCC 
CGAAAGAAGC AAGGCTTGAC TATCGCAGAC ATTGCGGAAC AGTCTGGCAT CAGCAGAGGC 
ATGTTGAGCA AGATTGAAAA TGGGCAGGTT TCTCCAAGCT TGGATTCCTT GTTAAAAATT 
TCTCGAACAC TGGGAGTGCC CATTTCCTCT TTTTTCAGGG AATTCGACAA CGAAGAAGGC 
GGAGCACAGC TTGTCAGATC AGAAGAAAAA CTGGAAGTCG TTCGCAGAGG CACCAAGGTA 
GGTCATACCT ATCATTTGCT GGCTTACGAC CATGGTCCAA AAAAGCTTTT TGAACCCTTT 
CTAATTTCAT TAGATAATAA AAGTGAAGTG TTTCCGACTT TCAGCCATGA AGGTAAGGTA 
TTTATGCATC TGTTAGAAGG TGAAATGATT TATCGCCACG GCAAACAAAC CTATCATATG 
AAGCCAGGGG ATTCACTCAC CTATGACGCA CGAATCTCCC ACGGCCCAGA AGAACTAATT 
GAAGTCCCCA TCCGTTTTCT AAATATCATT TTCTACGATC AAAATGCACC AGAATAA
 
Protein sequence
MSEKEHQTLD LHIGKIINNA RKKQGLTIAD IAEQSGISRG MLSKIENGQV SPSLDSLLKI 
SRTLGVPISS FFREFDNEEG GAQLVRSEEK LEVVRRGTKV GHTYHLLAYD HGPKKLFEPF 
LISLDNKSEV FPTFSHEGKV FMHLLEGEMI YRHGKQTYHM KPGDSLTYDA RISHGPEELI 
EVPIRFLNII FYDQNAPE