Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1334 |
Symbol | |
ID | 3760696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1449031 |
End bp | 1450086 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637786066 |
Product | S-adenosylmethionine |
Protein accession | YP_391603 |
Protein GI | 78485678 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.255126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGAC AAGATTTTAA CTTTGAACTG CCCGAAGCCC TGATTGCTCA ACAACCTGCC AAGGAAAGAA CGCAAAGTCG ACTGTTGGTG ATGAACGCTG ACGGTAGCGT GTCTGATTGC CATTTTCCCG ATATTTTGTC TTACGTGAAT GAAAATGATT GTTTGATTTT TAATAACACC AAAGTGATTC CAGCGCGTTT ATTTGGCCAA AAGCTAACCG GTGGAAAAGT CGAACTGTTG ATTGAACGTG TTTTAGATGA ACGTCGTGTT TTAACGCATA TTCGCTCAAG CAATGCCCCT AAATCAGGTG CCAAACTGCG TATCGAAGAG GCGTTTGATG CAGAGGTTTT GGGCCGAGAA GGTGCGTTGT TTGAAGTGCA GCTGAGTAAG GATGAGGCGC CCGAATTGAC CGCGTTGGAA CTTATTGAGG CGCATGGACA CATGCCGTTG CCGCCTTATA TTGAACGCGA AGATCAGCTG GAAGATAAAG AGCGTTATCA AACAGTGTAT TCTGAAAAGC CGGGTGCTGT GGCCGCACCA ACGGCCGGAT TGCATTTTGA TAATGACTTG CTGGACAAAA TTAAAGCAAA AGGCGCGGCG GCGGGTTTTG TGACCTTGCA TGTTGGTGCG GGCACGTTTA AACCGGTTCA GGTGGATGAT ATTTCTGAGC ATGTCATGCA TTCCGAAGTC ATTGAAGTGT TGCCTGAAAC TGTCGAGCTG ATAAAACAAA CACGTCAAAA AGGCGGCCGA GTGATTGCCG TGGGCACTAC CTCGGTTCGG TGTTTGGAAA GTGCCGCTAG CTTTTCAGAA AATGGCGAGC TTGCGCCTTA CCAGGGGGAA ACCGATATTT TCATTACCCC CGGTTATGAC TTTAAAGTAG TGGACGTTTT ATTGACGAAT TTCCATTTAC CCGAATCCAC CCTTATTATG CTGGTGTCGG CCTTGGCGGG ATACGATCGT ACCATGCAAG CCTATGCGCA TGCGGTGGAA CAAAAATACC GCTTCTTTAG TTACGGCGAT GCCATGCTGG TGCATCCGCC AACTTCCGAT TCTTAA
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Protein sequence | MRRQDFNFEL PEALIAQQPA KERTQSRLLV MNADGSVSDC HFPDILSYVN ENDCLIFNNT KVIPARLFGQ KLTGGKVELL IERVLDERRV LTHIRSSNAP KSGAKLRIEE AFDAEVLGRE GALFEVQLSK DEAPELTALE LIEAHGHMPL PPYIEREDQL EDKERYQTVY SEKPGAVAAP TAGLHFDNDL LDKIKAKGAA AGFVTLHVGA GTFKPVQVDD ISEHVMHSEV IEVLPETVEL IKQTRQKGGR VIAVGTTSVR CLESAASFSE NGELAPYQGE TDIFITPGYD FKVVDVLLTN FHLPESTLIM LVSALAGYDR TMQAYAHAVE QKYRFFSYGD AMLVHPPTSD S
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