Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1324 |
Symbol | |
ID | 3762194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1440321 |
End bp | 1441385 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637786056 |
Product | BNR repeat-containing glycosyl hydrolase |
Protein accession | YP_391593 |
Protein GI | 78485668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.12068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTGT GTCCTGACAT TCAACTGGAC TTTAAAATGG CGCCCAAAAC AGAGGCGCCG GTTTATTTGC ATGAAAACGT CTCGGCTTTA AAAATAGACC CCATCGGGCC TTATGTTCGT AATAAACAAG GCCATATTGT GTGTATTGAA GCTCGTCAGG CATTGCTGTC GAAGGATGAA GGGCAAACAT GGCAAGCCTA TGATTTGTTC TCATCCAATG AATTTCAGAT ACACGATACG CGCAGTCTGT GCATTTCCGA TTCCGGTGTG ATAGTGGTCG GCTTTTTGAA TATGGCGCAA GCCCATTTCA AATGGCACAA AAAAGCCAAT AAACCGACTC AAAATACCCG GTTGGATTTA TGGTCCGTTC GCAGTCTGGA TGGTGGCCAA ACCTGGGAAG CCCCCGTTCG TGTCCAAAAA GGCTATTGTG GCGCCACCAC AACCATGATT TCGCTTTCCA GCGGTGCCTT ATTAATGACG GCTCAAAATC TGGATTATGA AGCAGGCCGA CATTATAGCC TGACCTATCT TTCAGAAGAC GAAGGGCAAA GCTGGCACGC CAGCAATAAA ATTGATATTG GTGGTCAAGG GCATCATGGC GGTTGCTATG AGGGCACCTT GCTGGAATTG AAAGACGGTC GAGTCTGGTA TTTAATTCGC ACCAATCTCG ATTGGTTTTG GAATGGCTAT TCCAATAATC AAGGCAAGAC CTGGACGCAT TTAGAGCCGG GATTAAGCGC CGGCAGCTCT CCGGGCATGT TGTGTCGTTT ACAAAGCGGG CGTCTGCTTT TAGCCTACAA TCAAGTCACC AAAGAAGGGG AAACCCTTGC CCCTCGAATC GCCGGGTTGT TTTCAGAAGT GCCAGCCTCT TGGCAACGTG AAGAACTCAG TATTCGCCTG TCAGAGGATG ACGGAAAAAC TTGGAGCGAC CCAATCGTCA TTGCCGCTTG TAAAGGCGCA TGGCTGTCTT ACTGTTCTTT GTTTGAACCT CATGCTGGTG AAATTTGGCT CACCACCATG CAAAGTCAAC TTAAACTCAA GCTAAACGAA AACGACTTTA TTTAG
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Protein sequence | MQVCPDIQLD FKMAPKTEAP VYLHENVSAL KIDPIGPYVR NKQGHIVCIE ARQALLSKDE GQTWQAYDLF SSNEFQIHDT RSLCISDSGV IVVGFLNMAQ AHFKWHKKAN KPTQNTRLDL WSVRSLDGGQ TWEAPVRVQK GYCGATTTMI SLSSGALLMT AQNLDYEAGR HYSLTYLSED EGQSWHASNK IDIGGQGHHG GCYEGTLLEL KDGRVWYLIR TNLDWFWNGY SNNQGKTWTH LEPGLSAGSS PGMLCRLQSG RLLLAYNQVT KEGETLAPRI AGLFSEVPAS WQREELSIRL SEDDGKTWSD PIVIAACKGA WLSYCSLFEP HAGEIWLTTM QSQLKLKLNE NDFI
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