Gene Tcr_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1324 
Symbol 
ID3762194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1440321 
End bp1441385 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID637786056 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_391593 
Protein GI78485668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.12068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTGT GTCCTGACAT TCAACTGGAC TTTAAAATGG CGCCCAAAAC AGAGGCGCCG 
GTTTATTTGC ATGAAAACGT CTCGGCTTTA AAAATAGACC CCATCGGGCC TTATGTTCGT
AATAAACAAG GCCATATTGT GTGTATTGAA GCTCGTCAGG CATTGCTGTC GAAGGATGAA
GGGCAAACAT GGCAAGCCTA TGATTTGTTC TCATCCAATG AATTTCAGAT ACACGATACG
CGCAGTCTGT GCATTTCCGA TTCCGGTGTG ATAGTGGTCG GCTTTTTGAA TATGGCGCAA
GCCCATTTCA AATGGCACAA AAAAGCCAAT AAACCGACTC AAAATACCCG GTTGGATTTA
TGGTCCGTTC GCAGTCTGGA TGGTGGCCAA ACCTGGGAAG CCCCCGTTCG TGTCCAAAAA
GGCTATTGTG GCGCCACCAC AACCATGATT TCGCTTTCCA GCGGTGCCTT ATTAATGACG
GCTCAAAATC TGGATTATGA AGCAGGCCGA CATTATAGCC TGACCTATCT TTCAGAAGAC
GAAGGGCAAA GCTGGCACGC CAGCAATAAA ATTGATATTG GTGGTCAAGG GCATCATGGC
GGTTGCTATG AGGGCACCTT GCTGGAATTG AAAGACGGTC GAGTCTGGTA TTTAATTCGC
ACCAATCTCG ATTGGTTTTG GAATGGCTAT TCCAATAATC AAGGCAAGAC CTGGACGCAT
TTAGAGCCGG GATTAAGCGC CGGCAGCTCT CCGGGCATGT TGTGTCGTTT ACAAAGCGGG
CGTCTGCTTT TAGCCTACAA TCAAGTCACC AAAGAAGGGG AAACCCTTGC CCCTCGAATC
GCCGGGTTGT TTTCAGAAGT GCCAGCCTCT TGGCAACGTG AAGAACTCAG TATTCGCCTG
TCAGAGGATG ACGGAAAAAC TTGGAGCGAC CCAATCGTCA TTGCCGCTTG TAAAGGCGCA
TGGCTGTCTT ACTGTTCTTT GTTTGAACCT CATGCTGGTG AAATTTGGCT CACCACCATG
CAAAGTCAAC TTAAACTCAA GCTAAACGAA AACGACTTTA TTTAG
 
Protein sequence
MQVCPDIQLD FKMAPKTEAP VYLHENVSAL KIDPIGPYVR NKQGHIVCIE ARQALLSKDE 
GQTWQAYDLF SSNEFQIHDT RSLCISDSGV IVVGFLNMAQ AHFKWHKKAN KPTQNTRLDL
WSVRSLDGGQ TWEAPVRVQK GYCGATTTMI SLSSGALLMT AQNLDYEAGR HYSLTYLSED
EGQSWHASNK IDIGGQGHHG GCYEGTLLEL KDGRVWYLIR TNLDWFWNGY SNNQGKTWTH
LEPGLSAGSS PGMLCRLQSG RLLLAYNQVT KEGETLAPRI AGLFSEVPAS WQREELSIRL
SEDDGKTWSD PIVIAACKGA WLSYCSLFEP HAGEIWLTTM QSQLKLKLNE NDFI