Gene Tcr_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1285 
Symbol 
ID3761674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1400400 
End bp1401146 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content40% 
IMG OID637786017 
Productribosomal protein S2 
Protein accessionYP_391554 
Protein GI78485629 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000297191 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA TCATGGCTAA AGTCACTATG CGCCAAATGC TAGAAGCGGG TGTTCACTTC 
GGACATCAAA CGCGTTATTG GAACCCGAAA ATGGGTGAGT ACATCTTTGG TGCTCGTAAC
AAGATTCACA TTGTTAACTT AGAAAAAACA TTACCAATGT TCAATGATGC ATTGAACTTT
TTAGGTGGAA TCGCTGCAAA AAAAGGCACG GTTCTATTTG TAGGGACAAA GCGTGCAGCT
GGTGATCTAG TTGCTCAAGA AGCAAAACGC TGCGGTATGC CTTACGTAAA CCACCGTTGG
TTAGGTGGTA TGTTGACTAA CTTTAAAACA ATCAAGCAGT CAATCAAAAA CCTAAAAGAT
CTTGAAGTTC AAGAGCAAGA TGGTACGTTT GAAAAAATCA CGAAAAAAGA AGCGTTGATG
CGTTCACGCC AAAAAGCAAA GTTAGAGCTT TCTTTAGGTG GGATCAAAGA TATGCGAGCC
ATGCCTGATG CAATTTTCAT TATTGATACA GGTAATGAAA AAATTGCAAT TCAAGAAGCG
AAGAACCTAG GTATTCCAGT GGTTGGTGTT GTTGATACAA ACAATGATCC TAACGGTGTT
GATTACGTTA TTCCTGGTAA CGATGATGCT GTTCGCGCTG TATCTTTATA CCTTTCTGCC
GCTGCAGATG CGATCAATGA AGGTAAAGGT TCTATTACAA CAGCAGTTGA AGGTGATGAG
TTCGTTGAAG AGAAAGCTGA AGCTTAA
 
Protein sequence
MEKIMAKVTM RQMLEAGVHF GHQTRYWNPK MGEYIFGARN KIHIVNLEKT LPMFNDALNF 
LGGIAAKKGT VLFVGTKRAA GDLVAQEAKR CGMPYVNHRW LGGMLTNFKT IKQSIKNLKD
LEVQEQDGTF EKITKKEALM RSRQKAKLEL SLGGIKDMRA MPDAIFIIDT GNEKIAIQEA
KNLGIPVVGV VDTNNDPNGV DYVIPGNDDA VRAVSLYLSA AADAINEGKG SITTAVEGDE
FVEEKAEA