Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1272 |
Symbol | |
ID | 3761661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1387863 |
End bp | 1388486 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637786004 |
Product | ribonuclease H |
Protein accession | YP_391541 |
Protein GI | 78485616 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGACC CTCAAATTCA CTTGGATTTG ATGCCGCATG GCATTGCTGA TGAATTCATT GTTGGGGTTG ATGAAGTTGG ACGCGGCCCT TTGGTAGGGG ATGTTGTTGC TGCAGCTGTT ATTTTGCCGA AAGGGTGCGA GCTTTTATTA AAAGACTCTA AAAAGCTATC AGAAAGCAAA AGAGAGCTTA TTGCGCATCA AATACAGCAA GAAGCCATTG ATTTTTGCAT TGCTACAGCT TCCCCGGATG AGATTGATTC TTTGAATATT CTCCATGCAA CCATGCTTGC CATGAAACGT GCGGTTGAAG GGCTTAATAA CCCTATCAAA AAAGTGTTAG TGGACGGAAA CCGTTGCCCG AATGTTCCTT ATGAATGCGA AGCAATCGTT AAGGGCGATG GCAAGGTACC TGTGATCAGT GCAGCGTCTA TTTTAGCCAA GGTGCATAGA GATCAACAAA TGCAGGTATT GCATGAAGCC TACCCTGAGT ATGGGTTTGA TGCCCATAAA GGCTATCCTA CCAAGCTGCA TTTAGAAAAA CTGTCACAAC ACGGCCTAAT CCCTGGGTAT CGTCGCTCTT TTAAACCGGT TAAAAATATT TTGCAGTTGT TGGAAAAGAT ATAG
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Protein sequence | MTDPQIHLDL MPHGIADEFI VGVDEVGRGP LVGDVVAAAV ILPKGCELLL KDSKKLSESK RELIAHQIQQ EAIDFCIATA SPDEIDSLNI LHATMLAMKR AVEGLNNPIK KVLVDGNRCP NVPYECEAIV KGDGKVPVIS AASILAKVHR DQQMQVLHEA YPEYGFDAHK GYPTKLHLEK LSQHGLIPGY RRSFKPVKNI LQLLEKI
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