Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1221 |
Symbol | |
ID | 3761777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1337989 |
End bp | 1338897 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785953 |
Product | phosphonate-binding periplasmic protein |
Protein accession | YP_391490 |
Protein GI | 78485565 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCGT TTTTAAAGTG GATTCTTTTG GCGACCACAG CATTAACAGG GTGCGACCAA GGTTCCAGCA CGGATATTAC TCTTCATTAC AGCGAAACAC CGCCGACAAC TTCTATTACT GTATACCGTT TTGCTATTCA CCCGTTACAC AACCCACAAA AGCTTATCGA AACTTTTCAA CCATTGATTA ATGATCTAAA TCAACACCTA GATAAAGCAC GTATTGAACT GGAAGCTTCG CGTGACTACC AAGTTTATGA AGATAAAATT GACCGCCTTG AACCCGCGTT TTTATTGCCT AATCCATGGC AAACCTTAGT GGCCATGAAA AAAGGCTATA ACGTCATTGC TATGGCAGGC AATGCCAACG ACTTTAAAGG CATCATTATT GTGCGCAGAG ACAGCAATAT TAATACCCCA CAAGATTTAA TTGGTAAAAC CGTTGCATAC CCTTCACCTA CAGCATTAGC CGCTGCAATC ATGCCACAGT ATTTCTTACA TCAAGCGGGT TTGAATATTA ATAAAGATAT CAAAAATAAC TATGTTGGCT CACAAGAGTC GTCGATTATG AATGTTTATC TTGGTTCAGC GGCCGCTGGT GCAACTTGGC CACCACCTTG GCGGGCATTT AAAAAAGATA ATCCTCAGGA AGCGGCTCAA CTTAAGGTCA TTTGGCAAAC CAAGCCTTTA TTAAATAATT CAGTCATGGT ACGCGATGAT GTGCCGCCGG AGTTAGCTGA ACAGGTAAGA AAATATTTAT TAAAGCTCCA TCATCGAGAT CAAGGTCAAA AAATTTTAGC CGGCATGGAG ACAGAACAAT TTTATGCCGC TGATAATGCT CGTTACGATT TGGTACGAGA CTATGTTCAG CGTTTTGAGC AAAATGTAAG ACTGGTGAGG CAACCGTGA
|
Protein sequence | MKPFLKWILL ATTALTGCDQ GSSTDITLHY SETPPTTSIT VYRFAIHPLH NPQKLIETFQ PLINDLNQHL DKARIELEAS RDYQVYEDKI DRLEPAFLLP NPWQTLVAMK KGYNVIAMAG NANDFKGIII VRRDSNINTP QDLIGKTVAY PSPTALAAAI MPQYFLHQAG LNINKDIKNN YVGSQESSIM NVYLGSAAAG ATWPPPWRAF KKDNPQEAAQ LKVIWQTKPL LNNSVMVRDD VPPELAEQVR KYLLKLHHRD QGQKILAGME TEQFYAADNA RYDLVRDYVQ RFEQNVRLVR QP
|
| |