Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1219 |
Symbol | |
ID | 3761775 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1336428 |
End bp | 1337339 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637785951 |
Product | bile acid:sodium symporter |
Protein accession | YP_391488 |
Protein GI | 78485563 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTT TTTCGATTTA TCTTTTTCCC GTTTGGGTGT TGATCTTTTC AGCGTATGCG TTGATTTTTC CCGCGCCGTT GGTTGAGATG AAATCGTCTA TTGTACCGTT GTTGATGGCG GTAATGCTGG GCATGGGGAT GACGTTGCGC TGGCAGGATT TCGCAGAGGT GTTGCAGCGC AAAAGTGCGG TGTTGTTGGG GGTTGGTATT CAGTTTGTGG TGATGCCGTT AGCCGCTTTG GGGCTGTCGA ATGTGTTGAA CCTTTCTCAG GAATTAACCA TTGGGTTGAT GCTGGTAGGA GCAACAGCAG GGGGCACGGC TTCCAATGTG ATGACGTATC TGGTGAAAGG CAATGTGGCG TTGTCGGTGA GTATGACGCT GGTTTCTACC TTATTTGCGA TTGTGTTATT ACCCTTTCTC ACTTGGTTTT ATTTGGATGA GACGGTGGCC GTGCCAGCAT GGGAAATGGT GTTGAGTTTA ATTCAGTTGA TCTTAATACC GATTTCCGTT GGAGTGTTGC TCAATCACTT TTTTGCCAAA CCGTTGCAGT TGATTCAGCC AGTTTTACCG GTGTTTTCGA TGTTTGCGAT TATTTTTATT ATCGCGATTG TGGTGGCGTT GAACCATCTT CAACTGCAAA GTATCGTTTG GGTATTGGCC TTGGCAGTGG TGGTGCATAA TGCGATTGGC CTAATTTCAG GTTATGGTAT CAGTAAGTTA GTAGGGTTTG ATGAAAGAAC CGCGCGTACG GTGGCGATCG AAGTGGGTAT GCAGAACTCG GGACTGAGTG TGGCCTTGGC GTTAAAATAT TTCACCGCAA TGAGTGCGTT GCCAGGCGCA ATGTTCAGCG TGTGGCACAA TGTTTCAGGA TCGGTATTAG CCGCTTACTG GCAAAGAAAA GACCAACAAT AG
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Protein sequence | MAIFSIYLFP VWVLIFSAYA LIFPAPLVEM KSSIVPLLMA VMLGMGMTLR WQDFAEVLQR KSAVLLGVGI QFVVMPLAAL GLSNVLNLSQ ELTIGLMLVG ATAGGTASNV MTYLVKGNVA LSVSMTLVST LFAIVLLPFL TWFYLDETVA VPAWEMVLSL IQLILIPISV GVLLNHFFAK PLQLIQPVLP VFSMFAIIFI IAIVVALNHL QLQSIVWVLA LAVVVHNAIG LISGYGISKL VGFDERTART VAIEVGMQNS GLSVALALKY FTAMSALPGA MFSVWHNVSG SVLAAYWQRK DQQ
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