| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1179 |
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| Symbol | |
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| ID | 3760324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1285532 |
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| End bp | 1287979 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785903 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_391448 |
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| Protein GI | 78485523 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000610541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTG ACCAAATTGA ATTCAAAACA AATGTCTTTG TATTAGCTCT GAGAGATGTT
GTTGTCTTTC CGGGGATGGT TGTGCCTCTA TTTGTGGGAC GCCCCAAGTC GATGAATGCA
TTGAATGCGG CCATGAAAGA AGATAAACAG ATCTTTTTAG TGACGCAAAA AAATGCGACA
GAAGAAACGC CTACCATTGA CAACTTGTAT CAAACAGGAG TAATGGCCAA CATTCTTCAG
TTGTTGAAAC TTCCTGATGG CACATTAAAA GTGTTGGTTG AAGGGGTGAA ACGTTTTGAA
CTGCTGGCGT TGAATGATGA AGAGAATTTT TTAACAGGCG ACATTCAGCA AGTCGAGTCG
GACGAACAAC TGGATAACGA TGGGGTGGTG TTAGTTCGAA CCATTCAAGA ACGTTTTCAA
GATTACGCGG CACTGAAGAA AAAGATCCCG TCAGAAGTGT TAAAGAGTGT TCAAAAGATT
ACTGACCCCA ATCGTCTGGT TGACACGATT TCAGCCAACC TAAAACTAGG CATTGAAGAA
AAGCAGACGT TACTCGAAAT TTTAACGATT AACGATCGTC TCGAACATAT TCTAAAAACC
ATTGAAACCG AGATTGATTT ATTAGAATCT GAACAGCGTA TTAATTCGCG TGTGAAGAAG
AAAATGGATC AAACGCAGCG TAATTTCTAC TTAAACACCA AATTACAGGC AATTCACGAA
GAATTAGGGG ATTCCTCTGA AGACGGCGTG AGTGAGTTCA CTCGTTTAAA AGAGCAGATC
GAACAGGCTG GTATGACGAA AGATGCGCTT AAGGTGGCTG AAGATGAGTT AAAGAAACTT
AAAATGATGT CCCCGCAGTC GCCTGAAGCC AATATCATTC GTACGTACAT CGAATGGTTA
GTCAGCATTC CGTGGAAAAA ACGTTCACGT GTATCGAAAG ATTTAAATAA AGCGCAAACG
ATTCTTGATA AGCAGCATTA TGGGCTTGAG AAGGTCAAAG AACGCATTAT CGAATATCTG
GCCGTGCAAA AGCGTGTTAA CAAAATGAAA GGACCGATTC TATGTTTGGT TGGACCACCT
GGGGTTGGGA AAACCTCTTT GGCGCGCTCC ATTGCAGAAG CCACGAATCG TAAATACGTG
CGTATGTCAT TAGGTGGCGT GCGAGATGAG GCCGAAATTC GAGGACATCG TAAAACATAC
TTGGGCGCTT TGCCAGGTCG TGTCATCCAA AAAATGAAAA CCGCTGGCAC ACGCAACCCG
TTATTTCTTT TAGATGAAAT CGATAAAATG GCGCGTGATT TAAGAGGCGA TCCAGCTAGT
GCTTTACTAG AGGTGTTGGA TCCCGAGCAA AACAAAGCTT TCAACGATCA CTATCTGGAA
GTCGATTATG ACTTATCGGA TGTGATGTTT GTGGCCACAT CAAACTCGAT GGACATTCCT
GAAGCCTTGT TAGATCGTAT GGAAATCATC GACTTGGCCG GTTACACCGA AAACGAAAAG
CTTAACATTG CCACACAGCA TTTATTGCCA CGTGAAATTA AAGAGCATGG CTTAAAGCAA
GGCGAGTTAG AGGTGCCTTC TGATACGATT CTAAAAATCA TTCAAACCTA CACGCGTGAA
GCGGGTGTGC GATTGTTAGA TCAGAGTTTG GCAAAAATTT GTCGTAAATC CCTAAAGGAG
ATTGTGACAA ATGAAGCCAA AGCACCGATT ACTGTGACAC CTGATACTCT AGATAAGTAT
CTAGGGGTGG CAAAATATCG TTTCGGCCTA GCGGACGAAA CCAACCAGAT CGGTCAAGTC
GCCGGACTTG CCTGGACTCG AGTTGGCGGA GACTTGCTGC GTATCGAGGC AACAGCCATG
CCTGGTAAAG GTAAAAACAC ATCAACGGGT CAGCTTGGAA GCGTGATGCA AGAGTCCACT
CAGGCAGCCA TGAGCGTAAT ACGCAGTCGT TCAAAAGAAT TAGGGCTACC TGATGACTTC
TACGAGAAAC AGGACGTCCA CTTACACTTT CCTGAAGGCG CCATTAAAAA GGATGGGCCA
AGTGCCGGTA TTGCGATTTG TACAGCCATT GCGTCTGTGT TGACGCAGAT TCCTGTACGA
TCAGACGTGG CCATGACAGG GGAGATTACG TTGAGAGGGG AAGTATTACC AATTGGTGGG
TTGAAAGAAA AACTTTTAGC CGCCGCACGT GGCGGTATTA AAACCGTCTT AATTCCTTAT
GAAAATGTGC GCGATTTAGC CGAGATTTCT GATGAAGTGA AAGAGGGATT AGATATTCAT
CCTGTCCAAT GGATTGATGA AGTGTTTAAA ATCGCCTTAG AAAGTTTTCC AAATGTAGAA
AATGATGAGA TTTCTGCCAT TAGCATGAAA GATGCCGAAA TGGGAAAATT AGTGGCAAAT
AAGCAGTCCA CTAAGGAAAT TCAGAAAAAA AGCCCAAAAA GACACTGA
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| Protein sequence | MDIDQIEFKT NVFVLALRDV VVFPGMVVPL FVGRPKSMNA LNAAMKEDKQ IFLVTQKNAT
EETPTIDNLY QTGVMANILQ LLKLPDGTLK VLVEGVKRFE LLALNDEENF LTGDIQQVES
DEQLDNDGVV LVRTIQERFQ DYAALKKKIP SEVLKSVQKI TDPNRLVDTI SANLKLGIEE
KQTLLEILTI NDRLEHILKT IETEIDLLES EQRINSRVKK KMDQTQRNFY LNTKLQAIHE
ELGDSSEDGV SEFTRLKEQI EQAGMTKDAL KVAEDELKKL KMMSPQSPEA NIIRTYIEWL
VSIPWKKRSR VSKDLNKAQT ILDKQHYGLE KVKERIIEYL AVQKRVNKMK GPILCLVGPP
GVGKTSLARS IAEATNRKYV RMSLGGVRDE AEIRGHRKTY LGALPGRVIQ KMKTAGTRNP
LFLLDEIDKM ARDLRGDPAS ALLEVLDPEQ NKAFNDHYLE VDYDLSDVMF VATSNSMDIP
EALLDRMEII DLAGYTENEK LNIATQHLLP REIKEHGLKQ GELEVPSDTI LKIIQTYTRE
AGVRLLDQSL AKICRKSLKE IVTNEAKAPI TVTPDTLDKY LGVAKYRFGL ADETNQIGQV
AGLAWTRVGG DLLRIEATAM PGKGKNTSTG QLGSVMQEST QAAMSVIRSR SKELGLPDDF
YEKQDVHLHF PEGAIKKDGP SAGIAICTAI ASVLTQIPVR SDVAMTGEIT LRGEVLPIGG
LKEKLLAAAR GGIKTVLIPY ENVRDLAEIS DEVKEGLDIH PVQWIDEVFK IALESFPNVE
NDEISAISMK DAEMGKLVAN KQSTKEIQKK SPKRH
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