| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1157 |
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| Symbol | |
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| ID | 3760644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1257846 |
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| End bp | 1260386 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785881 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_391426 |
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| Protein GI | 78485501 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC GTATTGTTGT CATTGGTAAT GGGATGGTGG GACACAGTTT TCTCGAAAAA
CTTATCGCCA GCGAGGGGTT TGAAAACTTT GAGGTAACAG TTTTTGGAGA GGAACCTCGC
AAAGCATATG ATCGTGTGTA TTTATCTTCT TACTTTTCAG GCAAAACGGC TGAAGATTTG
AGCTTGGTTA AGCCGGGGCT CTATGAGGAA AATGGTATTC AGCTGTATTT GAAAGATAAA
GTCATCGATA TTGATCGTAC TCAAAAAACG ATTACGTCAG AATCCGGCCA GAAAATTTCC
TATGACAAGT TGATTCTAGC AACAGGTTCC TATCCCTTTG TACCGCCTAT CAAAGGGAAT
GATCGTGATA ACTGTTTGGT TTATCGAACG ATTGAAGATC TGGAAGCCAT CAAAGCTGCA
GCCTCTAATG GCAAAACAGG TGTGGTAGTA GGTGGTGGAT TATTGGGTTT AGAAGCCGCT
AAAGCGCTGA AAGATCTTGG TTTGGATACA CATGTGGTTG AATTTGCGCC AAGGTTAATG
CCCGTCCAAT TGGATGAAGG CGGCGCGGGA TTACTGAAAA GAAAAATTGA AAATATGGGC
GTACATGTCC ATGTTTCAAA AGCGACGCAA GAGATTACAG ACGGCGAAAA CTGCTTTAAT
AAAATGGTCT TTTCTGATGG TGAGTCCTTG GAAACCGATA TTGTTTTATT TTCAGCCGGT
ATACGTCCAC GTGATGATTT AGCAAAGCAA GCAGAATTAG CGATTGGGCC ACGTGGCGGG
GTTGAAATTA ATGATCAATG CCTGACATCA GATCCTAACA TTTATGCTAT TGGTGAATGC
GCGCTGCACA ACGGTGTGAT CTATGGACTG GTTGCGCCCG GTTATGCCAT GGCACAAGCG
GTCGTCGATC AACTCAATTT AACCTCTGCC AGCTTTGAAG GCGCGGATAT GAGCACCAAG
TTGAAGTTAA TGGGGGTTGA TGTTGGTTCC ATCGGAGACC CTCATGGTAA CGATGAGAGC
GCGTTGTCTT ATGTCTATGA AAATGGTCCG GAAGAGGTCT ATAAAAAAAT CGTCGTTTCG
TCAGATGGCC AGACATTATT AGGCGCGGTT TTGGTCGGAG ATGCAGAGGA TTTTAGCAAT
CTCTTGCAAA TCATGCTAAA TGACATGACG TTGCCAGAAC ACCCGGACTC GTTAATTCTT
CCTAATCGGG ATGGCGGCGG CAGTGACTTA TTCGGCCCAG ATGCCTTACC TGAAACAGCT
CAGCTTTGTT CGTGTTATGA CGTGTCCAAA GGTGACATTA TTCAAGCCGT TGAAGCAGGG
TGTTGCACGG TTTCAGACGT AAAAGCATCC ACACAAGCGG GTACAGGCTG CGGGGGATGT
GTTCAACTGG TGACCAATGT TTTAAACAAT GAGCTAGAAA AACGTGGGGT GGAAGTCAAT
ACCGACCTTT GCGAACATTT TAGTCATACC CGTCAAGAAC TGTTTCATAT TTGTCAGGTT
GAAGAAATTA AAACCTTCGA AGATCTTATA CAAAAGCATG GTCGTGGGCA CGGTTGTGAT
ATTTGCAAAC AAACCACAGG CAATATTTTT GCCTCTTTAT GGAATAGCTA TGCCTTGGAA
CCTGACAAAA TTCCACTGCA AGATACCAAT GATAATTATT TGGGTAACAT GCAAAAAGAT
GGAACGTATT CGGTGATTCC TCGAGTGCCT GGAGGGGAGA TAACGCCTCA AAAATTAATC
GTTCTGGGTC AGGTTGCGAC TAAATACAAA CTCTATACAA AGGTTAACGG GGGACAACGA
ATTGTGCTGT TTGGGGCGCA GATGAATGAC CTTCCTGCGA TTTGGAAAGA ATTGATTGAT
GCAGGGTTTG AGTCTGGTCA AGCTTACGCT AAAGCTCTTA GAACGGTTAA GTCATGCGTA
GGGTCAACCT GGTGTCGTTA TGGTTTAGAC GATTCTGTCA CCATGGCGAT TGACATGGAA
AATCGTTATA AAGGGCTTCG CTCACCCCAT AAAATCAAAA TGGGTGTGTC GGGTTGTACA
CGTGAGTGTG CGGAAGCACA GGCAAAAGAC ATTGGGTTGA TTTCAACAGA AGAAGGCTGG
AATTTATATG TGTGTGGTAA CGGAGGAATG AAGCCGCGCC ATGCTGACTT ATTTGCAACA
AAATTGACTC AGGAAGAGGT TTTCCGTTAT GTCGATCGGT TATTGATGTT TTATATCAAA
ACGGCGGATC GTCTACAAAG AACCGCCAGT TGGCTGGATA ACCTAGAAGG TGGGTTAACT
TATTTACAAG AGGTCGTGAT TCAAGATTCA TTAGGCATTG GCGAGTCTCT CGAAGATCAA
ATGAAACGTT TGCGTGAGAC TTATGAGTGT GATTGGAAGC GAGCTATTGC AAACCCATCC
TTTACGAAAA GATTCCGTTC TTTTGTCAAT GTGGACAATA AAGCCGAGCA GTTGTTTGTT
CAAGAACGAG GGCAAATTCG GCCGGCCACC GAGCAGGATA AATTGAACGG AATTGCGGTT
CAAGTTAAAG AAATCGCTTA A
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| Protein sequence | MKQRIVVIGN GMVGHSFLEK LIASEGFENF EVTVFGEEPR KAYDRVYLSS YFSGKTAEDL
SLVKPGLYEE NGIQLYLKDK VIDIDRTQKT ITSESGQKIS YDKLILATGS YPFVPPIKGN
DRDNCLVYRT IEDLEAIKAA ASNGKTGVVV GGGLLGLEAA KALKDLGLDT HVVEFAPRLM
PVQLDEGGAG LLKRKIENMG VHVHVSKATQ EITDGENCFN KMVFSDGESL ETDIVLFSAG
IRPRDDLAKQ AELAIGPRGG VEINDQCLTS DPNIYAIGEC ALHNGVIYGL VAPGYAMAQA
VVDQLNLTSA SFEGADMSTK LKLMGVDVGS IGDPHGNDES ALSYVYENGP EEVYKKIVVS
SDGQTLLGAV LVGDAEDFSN LLQIMLNDMT LPEHPDSLIL PNRDGGGSDL FGPDALPETA
QLCSCYDVSK GDIIQAVEAG CCTVSDVKAS TQAGTGCGGC VQLVTNVLNN ELEKRGVEVN
TDLCEHFSHT RQELFHICQV EEIKTFEDLI QKHGRGHGCD ICKQTTGNIF ASLWNSYALE
PDKIPLQDTN DNYLGNMQKD GTYSVIPRVP GGEITPQKLI VLGQVATKYK LYTKVNGGQR
IVLFGAQMND LPAIWKELID AGFESGQAYA KALRTVKSCV GSTWCRYGLD DSVTMAIDME
NRYKGLRSPH KIKMGVSGCT RECAEAQAKD IGLISTEEGW NLYVCGNGGM KPRHADLFAT
KLTQEEVFRY VDRLLMFYIK TADRLQRTAS WLDNLEGGLT YLQEVVIQDS LGIGESLEDQ
MKRLRETYEC DWKRAIANPS FTKRFRSFVN VDNKAEQLFV QERGQIRPAT EQDKLNGIAV
QVKEIA
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