| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1129 |
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| Symbol | |
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| ID | 3762070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1217516 |
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| End bp | 1219600 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785850 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_391398 |
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| Protein GI | 78485473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAGT TTATTAAGTC TTTTCAGTAT GGAAAGCATG AAGTTCGTTT TGAAACCGGT
GAAATAGCAC GTCAAGCCGA TGGTGCGGTA ATGGTTGCAA TGGGCGATAC CCAGTTATTA
GTGACGGTTG TAGGTGCCAA AAATGCCAAA GCCGGTCAAG ACTTCTTTCC ATTAACGGTT
CAGTATCAAG AAAAAGCCTA TGCAGCCGGA CGTATTCCTG GCGGGTTTTT AAAGCGTGAA
GGCCGACCTT CAGAAAAAGA AACGTTGACG TCTCGTTTAA TCGATCGTCC AATTCGTCCT
CTATTCCCAA AAGGGTTTAT GAATGAAGTG CAAGTGATTG CAACTGTGGT TTCTTTAGAC
CCTGAAATTG GCACGGAAGT TCCTGCTATG TTGGGAACGT CTGCCGCCTT GTCTATTTCA
GGCATTCCTT TTGATGGCCC GATAGGCGCC GCTGTAGTCG GGTATAAAGA CAATGATTAC
ATTTTGAACC CTTCTAGCCA AGAGCTTCAA GAATCAGATT TGGAATTGAG TGTTGCCGGA
ACGTCTGACG CCGTGCTAAT GGTTGAGTCT GAAGCCTCTG AGTTATCTGA AGAAATCATG
CTAGGTGCGG TGATGTTCGG GCACGAACAA ATGCAAGTGG CCATTGATGC AATTAAAGAA
TTAAAAGCCG AAGTCGGCAA GCCCGCTTGG AACTGGGAAG CCGCCGAAGA AGATATTGAC
TTAAAAACCA AAGTCTTTGA CGCGATTCGA TCTGATATTG AAGCAGCTTA TGACATTGCC
GATAAAATGG ATCGTTATGC TGCGATTGAT GCGGCCAAAA CGAAAGTCAT GGAAGCGCTT
GCGGCCACAG AAGAAAATCC GGAAGGGTAT GATGCCGGAG ACATTGAAAA AATGGTCGGT
AAATTACAGA AAGAGATTGT TCGTGGACGC ATTATTGCTG GCGAACCTCG TATTGACGGC
CGTGATACCC AAACAATCCG TAGCATTGAC TGTCAGGTCG GTATTTTACC GAAAGTGCAT
GGTTCGGCTT TATTTACACG TGGAGAAACG CAAGCCATTG TTGTTACCAC GTTAGGAACG
GAAAAAGACG CTAAGATGGT CGATGATCTA ACAGGCTCTT ATAATGATCG TTTCATGCTG
CATTACAACT TCCCTCCATA TTCTGTAGGT GAGTGTGGGC GTGTTGGTTC TCCTGGACGT
CGTGAAATTG GTCACGGTAT GTTGGCTCGC CGAGGGGTGG CGGCTTTACT ACCAACGGCA
GACGAATTCC CTTACACCAT TCGTGTTGTG TCTGAAATCA CGGAATCTAA TGGTTCTTCT
TCAATGGCAA CGGTGTGTGG GACATCAATG TCTTTAATGC ATGCAGGGGT TCCTCTTGCC
GCACCGATCG CAGGGATTGC AATGGGCTTG GTTAAAGAAG AATCCGGTTT TGCCGTTCTG
TCTGATATTC TTGGAGATGA AGATCATCTA GGGGATATGG ACTTTAAAGT GGCCGGAACC
GAACAAGGTG TGACAGCATT GCAAATGGAC ATCAAGATCA CCGGAATTAC GCAAGAAATT
ATGCATATAG CTTTAAAGCA AGCAAAAGAA GGTCGTTTGC ATATCTTGAA AGAAATGGAA
AAAGCAATCG GTTCATCAAA TCAAGATGTG GCAACGACGG CACCACGTTT CTTTACCGTG
AAAGTGAAGC CTGAAAAAGT CCGTGAAATC ATTGGTAAAG GTGGGGCCAC CATCCGTTCG
ATTACCGAAG AAACAGGGGT GACCATTGAA ATTGATGATG ATGGTAATGT AAAAATTGCT
GCAGTGGATG ACGAATCCGC TAATGCTGCT AAAGCGCGTA TTGCAGAGAT TACAGCTGAG
CCTGAAATTG GTAAAGTGTA TGATGCCAAA GTGGTTAAGA TTGTTGATTT CGGTGCTTTC
GTTTCTTATA TGCCTGGCCG TGAAGGTTTG GTTCATGTTT CACAGATTGC CGATGAACGT
GTTGAAGATG TCAATGAATA TTTGAAAGAA GGACAGGAAA TTAAAGTTCG TCTGACAGAT
GTCGACAAAC AAGGCCGCGT TAAACTGTCT ATAAAGGCGG TTTAA
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| Protein sequence | MSKFIKSFQY GKHEVRFETG EIARQADGAV MVAMGDTQLL VTVVGAKNAK AGQDFFPLTV
QYQEKAYAAG RIPGGFLKRE GRPSEKETLT SRLIDRPIRP LFPKGFMNEV QVIATVVSLD
PEIGTEVPAM LGTSAALSIS GIPFDGPIGA AVVGYKDNDY ILNPSSQELQ ESDLELSVAG
TSDAVLMVES EASELSEEIM LGAVMFGHEQ MQVAIDAIKE LKAEVGKPAW NWEAAEEDID
LKTKVFDAIR SDIEAAYDIA DKMDRYAAID AAKTKVMEAL AATEENPEGY DAGDIEKMVG
KLQKEIVRGR IIAGEPRIDG RDTQTIRSID CQVGILPKVH GSALFTRGET QAIVVTTLGT
EKDAKMVDDL TGSYNDRFML HYNFPPYSVG ECGRVGSPGR REIGHGMLAR RGVAALLPTA
DEFPYTIRVV SEITESNGSS SMATVCGTSM SLMHAGVPLA APIAGIAMGL VKEESGFAVL
SDILGDEDHL GDMDFKVAGT EQGVTALQMD IKITGITQEI MHIALKQAKE GRLHILKEME
KAIGSSNQDV ATTAPRFFTV KVKPEKVREI IGKGGATIRS ITEETGVTIE IDDDGNVKIA
AVDDESANAA KARIAEITAE PEIGKVYDAK VVKIVDFGAF VSYMPGREGL VHVSQIADER
VEDVNEYLKE GQEIKVRLTD VDKQGRVKLS IKAV
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