Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1119 |
Symbol | |
ID | 3762060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 1206943 |
End bp | 1208790 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785840 |
Product | signal-transduction protein |
Protein accession | YP_391388 |
Protein GI | 78485463 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTATTC AGCAACAGTT AAATTTTTTA AAGCAAGTGG AACCGTTTTC AGCCTTGAGT TTGAAAGAGT TAACGCGGTT AGCCTCTGCG CTGGATGTAG TGTATTTTCC TTTAAAGACG ACACTTGAAC TGTCAAGTCA TGCGTCTTCA AAGCAAAGTA CATTTTTATA TTTTGTGATT AAAGGGCATA TTGCCGAATT TGACGAAAAC AATCGTCAAA GAGCGGTGTA TGGCGCGAAC ACTTTTTTCG GGGATGCGTT GTTATTAAAA AGAGAATCGT ATCTTCGTTA TGAAGTGATT GAAGAGGCAA TTGCTTATCG CTTGCCGCAA ACCGTTTTCC TTGAACTGGT CTCTCAGCCT GAAATTCAAG GGTTCTTTAT TGATGATATC ACCGCAAAAC TGAATCGGCT TCATGCTCAA ATTCAAGCGG AGTCCTCCAG TGAAGCCTTA ATGGGGATTG TCGAAGAAGC ACCATTACAA TCTCTGGTGG AAGTCAACGA ATCAGCCAGC ATAGAAGAGT GTGTTCAAAA AATGCGGCAA TACCAAACGG ATGCTTGTGT GGTGCGTTTT AGCGCCTCCA ATGACGTTGG GATTGTAACC TCAATTGATT TACTTAATGC GCTCGCATTG GATCATTTAT CTGTAAAGGC AGAAGTCGGG AGTTTAGCGA CCGTGCCGAT AGTCTCGGTT CATCAATTCG ATTATTTATT TAATGCGTTA CTTAAGATGA CCAAGTTTCG AATCAATCGT TTGGTGGTTC GGTCTGATGA AGGTTTGGTT GGGGTGTTGC ATCAGAAAGA TTTAATGGGA ATGTTTGCCA ACCAGTCCGG TTTGGTGGTG TTGAGTATTC AGCAAGCGGA AAAAATGGAC GACTTGAAAA GCGTGATTCA TCAAATTGAT GCACTGGTAA TCAATTTAAA CAATCGCGGC GTGAAAACGC ATTACATTGC CAAGCTTGTC AACGAGCTGC ACCGCAAAGT TATGGAAAAA GTGTTTGAGT TCTTAAAACC TTTTCCGGAA CTGCAATCAG GCTGTTTGCT GGTGATGGGC AGCGAAGGGC GTGCAGAGCA AGTGATTAGA ACGGATCAGG ACAATGCCTT CATTTTGCCG GATTCCGCTA AGAATCTCCC AGGCCTGGTG GATTTTATGC AAGAGTTCAC TCACAGTTTG ATCGCATTAG GTTTTCCGCC TTGTCCTGGT AATATCATGG TTTCAAATCC AGCGTGGTGT CAAACCTTGT CGGAATTTAA ACAGCAACTT AGAGAATGGA TGATGCAGCC AACCGCGGAG GCGTTCATGA ATTTATCGAT TTTCTTTGAT GCCGATGTCG TTCTGGGGGA TGACTCATTA TTATTGGAAG CCAAGCAGGT TATGTTGAAC TGGGTGGCCG CGAATCAACA CTTTCTACCG CATTTTGCCA AGCCTGTTTT GCAGTTTGAG ACCCCGATTA GTTTTTTTGG CAAACTGGTC ACGGATAAAA AATCTCGCAA ATCGCAAATT GACATTAAAA AAGGCGGTGT TTTTCCAATC GTTCATGGCG TTCGATGTTT GGCAATCGAG AAAGGTATTT TAAAAACCAA TACTCATTGG CGCATAAAAG CGCTGATGCA ACAAGGTGTT TTAACAGACG CATTTGGCAT AGAACTGGGA GAAACCTTAA ATTTTTTAAA CACGCTCAGG TTGGAATCGA TGGTTGATCA AGTGCGGCGA GATCAGGTTC CGGATAACTT TTTGCAAGTG TCTGATTTAA CGCCCATTCA ACAAGATTTA TTAAAAGAAG CCTTTAGTGT GGTGAACCGG TTCAAAAAAT TGATCGACCA TCACTTTAAA GTTTCTGCGG TTTTATAG
|
Protein sequence | MSIQQQLNFL KQVEPFSALS LKELTRLASA LDVVYFPLKT TLELSSHASS KQSTFLYFVI KGHIAEFDEN NRQRAVYGAN TFFGDALLLK RESYLRYEVI EEAIAYRLPQ TVFLELVSQP EIQGFFIDDI TAKLNRLHAQ IQAESSSEAL MGIVEEAPLQ SLVEVNESAS IEECVQKMRQ YQTDACVVRF SASNDVGIVT SIDLLNALAL DHLSVKAEVG SLATVPIVSV HQFDYLFNAL LKMTKFRINR LVVRSDEGLV GVLHQKDLMG MFANQSGLVV LSIQQAEKMD DLKSVIHQID ALVINLNNRG VKTHYIAKLV NELHRKVMEK VFEFLKPFPE LQSGCLLVMG SEGRAEQVIR TDQDNAFILP DSAKNLPGLV DFMQEFTHSL IALGFPPCPG NIMVSNPAWC QTLSEFKQQL REWMMQPTAE AFMNLSIFFD ADVVLGDDSL LLEAKQVMLN WVAANQHFLP HFAKPVLQFE TPISFFGKLV TDKKSRKSQI DIKKGGVFPI VHGVRCLAIE KGILKTNTHW RIKALMQQGV LTDAFGIELG ETLNFLNTLR LESMVDQVRR DQVPDNFLQV SDLTPIQQDL LKEAFSVVNR FKKLIDHHFK VSAVL
|
| |