| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1101 |
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| Symbol | |
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| ID | 3760713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1183165 |
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| End bp | 1185384 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785822 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_391370 |
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| Protein GI | 78485445 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA AGATTATTTA TACATTAACG GATGAAGCAC CTGCACTAGC AACTTATTCT
CTTTTACCGA TTGTCGAAGC CTTTACCAAG GCCGCGGGCG TGTCGGTTGA AACACGGGAT
ATTTCGTTAG CAGGTCGTAT TCTTGCAAAC GTTCCTGACA AGTTGAGTGA GGCACAAAAA
GTAGGGGATG CTTTAACCGA GTTGGGTAAT TTAGCGAAAA CGCCTGAAGC AAACATTATT
AAGCTGCCGA ATATCAGTGC TTCCGTACCG CAATTGAATG CCGCTATTAA AGAATTGCAA
AGCCAGGGAT ATGACATTCC CGATTATCCG GCAACACCAC AAAATGCCGA AGAAGAAAAA
ATCAAAGCGG CTTATGCCAA AGTGCTTGGA AGTGCGGTCA ATCCGGTTTT GCGCGAAGGG
AATTCCGACC GTCGAGCGCC GACTTCGGTG AAAAACTTTG CCAAAAAACA CCCGCATTCA
ATGGGCGCTT GGTCTGAAGA TTCAAAATCG AAAGTGGCAC ACATGACCGA AGGCGACTTT
TACGGTTCAG AAAAATCGAT GACGTTACCG GAAGCGACGG AATTTAAAAT TGAATTCGTT
TCTGAATCAG GTGACATTAA AGAGTTGAAA GGCACCGCGC CTTTGCAAGC GGGTGAAGTG
ATTGATGCGG CTGTCATGAG TCAGAAAGCG TTAAGAGACT TCCTGGCCAA AGCCGTTGCG
GAAGCAAAAG AACAAGGTAT TTTGTTCTCG ATTCATTTGA AAGCGACCAT GATGAAGGTG
TCTGACCCGA TTATTTTCGG TCAAGCCGTT TCGGTTTTCT TTGAAGACGT CTTTAAAAAA
TACGCTGATG AGTTTAAAAA ACTGGGTGTG AATCCGAATA ATGGCTTGGG AGACGTTTAT
TCCAAAATCG AATCGTTGCC AGCGGATAAA CAAGCCGAAA TTGAAGCCTC CATTGCTAAA
ACCATTGAAG ACAAAGCGGA TGTCGCGATG GTCGATTCGG ATAAAGGCAT CACTAATTTA
CATGTACCAT CCGATGTGAT TGTTGATGCG TCAATGCCAG CGATGATTCG TACCTCAGGG
AAAATGTGGA ATAAAGACGG TCAACAACAA GATGCTTTGG CGGTGATTCC AGACCGTTGT
TATGCAGGCG TTTACCAAGA AACCATTAAT TTCTGTAAGC ATCACGGCGC GTTTGACCCA
ACCACAATGG GAACCGTGCC TAATGTGGGC TTGATGGCTC AGAAAGCCGA AGAATACGGT
TCACATGATA AAACCTTCCA AATGGACAAT GCCGGTACGG TTCGAGTGGT TGAACCGAAT
GGCAACGTAC TGCTGGAACA AACGGTTGAA GCAGGCGATA TTTTCCGTAT GTGTCAGGTA
AAAGATGCGC CGATTCAAGA CTGGGTTAAA CTGGCCGTGA ATCGTGCGCG TGCCACTAAT
ACACCGGCGG TTTTCTGGCT GGATACTAAT CGCGCACATG ACCATCAGTT GATTGAAAAA
GTGAACCACT ACTTATTGGA TCACGACACA ACGGGATTGG AAATTCACAT TATGTCGCCA
GAGGAAGCCA CGCGCTTTAC TTTGCGTCAT GTAAAAGAAG GCAAGGATGT CATTTCGGTT
ACGGGGAACG TGTTGCGTGA TTACCTAACG GACTTATTCC CGATTTTAGA ATTAGGAACA
TCTGCAAAAA TGCTGTCAAT CGTGCCGTTG ATGAATGGTG GTGGCTTGTT TGAAACCGGC
GCGGGTGGGT CAGCACCAAA GCACGTTCAA CAATTCATGA GCGAAAACCA TTTACGTTGG
GACTCTTTGG GTGAATTCCT GGCTTTAGCT GTATCGCTTG AACATTTGGC AACCCATTTC
AACAACCCGA AAGCACAAGT GTTGGCCGAT ACCTTAGATA AAGCCACGGG GCGTTTCCTG
GAAAACAATA AATCGCCATC TCGTAAAGTG GGGGAAATTG ATAACCGTGG CAGTCATTTC
TATTTAGCGA TGTACTGGGC ACAGGAATTG GCGGCACAAA AAGCCGATGC GGAGCTGAAA
GCCCGTTTTG AAAAAGTGGC GGATGCGTTA ACGCAAAATG AAGACACGAT TATGTCGGAA
TTAAATGGCT CGCAAGGCAA GTCAGTTGAT ATCGGTGGCT ACTACAAATT CAATGGTGAG
TTGGCGAGCC AAGCCATGCG TCCAAGCGCT ACGTTAAACA CGTTGATTGA TGCTGTTTAA
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| Protein sequence | MTAKIIYTLT DEAPALATYS LLPIVEAFTK AAGVSVETRD ISLAGRILAN VPDKLSEAQK
VGDALTELGN LAKTPEANII KLPNISASVP QLNAAIKELQ SQGYDIPDYP ATPQNAEEEK
IKAAYAKVLG SAVNPVLREG NSDRRAPTSV KNFAKKHPHS MGAWSEDSKS KVAHMTEGDF
YGSEKSMTLP EATEFKIEFV SESGDIKELK GTAPLQAGEV IDAAVMSQKA LRDFLAKAVA
EAKEQGILFS IHLKATMMKV SDPIIFGQAV SVFFEDVFKK YADEFKKLGV NPNNGLGDVY
SKIESLPADK QAEIEASIAK TIEDKADVAM VDSDKGITNL HVPSDVIVDA SMPAMIRTSG
KMWNKDGQQQ DALAVIPDRC YAGVYQETIN FCKHHGAFDP TTMGTVPNVG LMAQKAEEYG
SHDKTFQMDN AGTVRVVEPN GNVLLEQTVE AGDIFRMCQV KDAPIQDWVK LAVNRARATN
TPAVFWLDTN RAHDHQLIEK VNHYLLDHDT TGLEIHIMSP EEATRFTLRH VKEGKDVISV
TGNVLRDYLT DLFPILELGT SAKMLSIVPL MNGGGLFETG AGGSAPKHVQ QFMSENHLRW
DSLGEFLALA VSLEHLATHF NNPKAQVLAD TLDKATGRFL ENNKSPSRKV GEIDNRGSHF
YLAMYWAQEL AAQKADAELK ARFEKVADAL TQNEDTIMSE LNGSQGKSVD IGGYYKFNGE
LASQAMRPSA TLNTLIDAV
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