| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1001 |
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| Symbol | aceE |
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| ID | 3760487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1077904 |
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| End bp | 1080564 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785722 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_391270 |
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| Protein GI | 78485345 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00011508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA AGTTCGTTGA TCAGGATCCA CAAGAAACAC AAGAGTGGAT TGACGCATTA
GAAGCTGTTG TCTCCTTTGA AGGATCTGAC AAGGCTCAAC ATATCATTGG CACTTTAATT
GAGAAAGCAC GTGTCCATGG TATCGACATT CCTTATTCGG CAAACACGCC TTATATCAAT
ACCATTGCCC CAGAAGAGCA AGAAAACTAT CCCGGCGACG TAGGCATTGA ACGTAAAATG
CGTGCATTAC TTCGCTGGAA TGCGATGGCA ATGGTGTCAA GAGCAAACAA ATACACCAGT
GTCGGTGGTC ATATTGCCTC GTATGCTTCA AGCTGTACTT TATATGAAGT TGGGATGAAC
CACTTCTTTA AAGGACCGAA GCATAAACAA GGTGCAGACA TGATTTTCTT CCAAGGACAC
ACAGCACCTG GAATGTATGC ACGCTCTTAT ATGGAAGGTC GTTTAGAAGC GGATCAACTA
AGAAATTATC GTCAAGAAGT AGACGGAAAC GGTCTTTCTT CTTATCCTCA CCCTTGGTTA
ATGTCAGACT ACTGGCAGTT CCCAACAGTC TCAATGGGCT TGGGGCCTTT AATGGCCATT
TACCAAGCGC GTTTCATGAA ATACATGCAA GCACGTGGTT TAGCGGAAAC AGAAGGGCGT
AAAGTTTGGG CCTTCTTGGG TGACGGTGAA ATGGATGAAC CGGAATCACG TGGTGCTTTA
CAGCTTGCCA AGCGTGAAAA TCTGGACAAC CTTATTTTCG TCATCAACTG TAACCTACAA
CGTTTGGATG GCCCGGTTCG AGGGAATGAC AAAATCATTC AAGAACTGGA AGGGGTTTTC
CGTGGTGCCG GTTGGAACGT CATCAAGGTC ATCTGGGGGT CAGGCTGGGA TCGTCTGTTA
TCGAAAGACG TCACCGGTAA ACTGATCGAA CGTATGGGTG AAGTTGTGGA CGGTGAGTAC
CAAGCTTATA AAGCAAAAGA CGGTGCTTTC GTTCGTGAAC ACTTCTTTGG TAAATACCCA
GAAACAGCTG AGCTGGTTAA AGACATGACG GACGATGAAA TTTTCCGTCT AACACGTGGT
GGTCATTCGC CACGTAAGAT TTACAACGCG TATAAGCGTG CGACCGAAAC ACAAGGTCAA
CCGACTGTTA TCCTAGCCAA AACCGTTAAA GGGTATGGTA TGGGGCAGTA TGGTGAAGCA
GCGAACACTG CGCATCAGCA GAAGAAACTG GATATTGAAG GTATGAAATA CTTCCGTGAC
CGTTTCTCTG TACCGATTTC AAATGAAGAG CTGGAAAAAG ACATTCCTTT CCATCGTCCA
GATGAAGATT CCGACGTTCT GAAATACATG AAAGAACGTC GTGAAGCATT GGGTGGCGAT
TTACCAAGCC GTCAAGATAC AGCCGAGCCA CTTCCAGTGC CAGACCTGTC TGTTTTCAAA
ATGTTAACAG AAGGGACGGA AGACCGCGAA ATGTCGACGA CTATGGCGTT CGTACGTATC
ATCTCAATCT TGTTAAGAGA CAAGAAAATC GGGCCACGTT GTGTTCCGAT CATTCCAGAT
GAAGCCCGTA CTTTCGGGAT GGAAGGTTTG TTCCGTCAAG TCGGTATCTA CGATCCAGCC
GGTCAGTTAT ATGAGCCAAT GGATTCAGAC CAACTGATGT GGTACAAAGA ATCAGCCAAC
GGGCAAGTTT TCCAAGAAGG GATCAACGAA GCCGGTGCCA TGTCTAACTG GATCGCAGCG
GCCACCGCTT ATGCCAACTA TGGTGTGAGC ATGGTGCCTT TCTATATTTA CTACTCCATG
TTCGGTTATC AGCGTATTGG TGACTTGGCA TGGGCCGCAG GGGATTCACG TGCACGTGGT
TTCCTAATGG GTGGAACAGC CGGTCGTACC ACGTTAGAAG GAGAGGGGCT ACAGCATCAG
GACGGTCATA ACTTGATTCA ATTCGATCAT GTCCCGAACT GCTTGTCTTA TGACCCAACC
TTTGCGTATG AAATGGCTGT CATCATTCGT GATGGTATTA AACGTATGTT CAATGAAAAA
GAAGACGTTT ACTACTACAT TACGTGTATG AATGAAAACT ACTCGCACCC TGCGATGCCG
GCAGGCTCGG AAGAAGGCAT TCTAAAAGGT CTTTATTCCT TTAAGAAGTC TGAAGCGAAA
CATAAAAACA AAGTTCAGTT GATGGGGTCC GGTACGATTT TCCGTGAAGT GATCGCTGCG
GCTGAAATGT TAGAAAACGA ATGGGATGTT GCAGCGGATA TCTGGGCGGC ACCAAGTTTC
AACCTATTAC GTCGTGACGG GGTTGAAACC ACGCGCTGGA ATACCATGCA CCCAACTGAA
AAGCCAAAAG TTTCTTATTG TGAAGCCACA TTATCGGGTG CGAAAGGCCC GTTTATTGCG
GCAACGGATT ATATCCGCGA TTACCCAAAC CGTATTCGTG AATATGTTCC GGGTGAGTTC
TATGTGTTAG GAACGGACGG TTTCGGGCGT TCTGATACGC GTGAACAACT TCGTAAGTTC
TTTGAAGTGA ACCGCTACTA CGTAGTAGTG GAATCTCTCA AAGCCTTGGC AGATGCCGGT
AGCATCAAGC CAGAAGTGGT TCAGAAAGCA ATTGAAAAAT ACGGAATTGA TAGCGAAAAA
ACCTATCCCG TTCATGCTTA A
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| Protein sequence | MNDKFVDQDP QETQEWIDAL EAVVSFEGSD KAQHIIGTLI EKARVHGIDI PYSANTPYIN
TIAPEEQENY PGDVGIERKM RALLRWNAMA MVSRANKYTS VGGHIASYAS SCTLYEVGMN
HFFKGPKHKQ GADMIFFQGH TAPGMYARSY MEGRLEADQL RNYRQEVDGN GLSSYPHPWL
MSDYWQFPTV SMGLGPLMAI YQARFMKYMQ ARGLAETEGR KVWAFLGDGE MDEPESRGAL
QLAKRENLDN LIFVINCNLQ RLDGPVRGND KIIQELEGVF RGAGWNVIKV IWGSGWDRLL
SKDVTGKLIE RMGEVVDGEY QAYKAKDGAF VREHFFGKYP ETAELVKDMT DDEIFRLTRG
GHSPRKIYNA YKRATETQGQ PTVILAKTVK GYGMGQYGEA ANTAHQQKKL DIEGMKYFRD
RFSVPISNEE LEKDIPFHRP DEDSDVLKYM KERREALGGD LPSRQDTAEP LPVPDLSVFK
MLTEGTEDRE MSTTMAFVRI ISILLRDKKI GPRCVPIIPD EARTFGMEGL FRQVGIYDPA
GQLYEPMDSD QLMWYKESAN GQVFQEGINE AGAMSNWIAA ATAYANYGVS MVPFYIYYSM
FGYQRIGDLA WAAGDSRARG FLMGGTAGRT TLEGEGLQHQ DGHNLIQFDH VPNCLSYDPT
FAYEMAVIIR DGIKRMFNEK EDVYYYITCM NENYSHPAMP AGSEEGILKG LYSFKKSEAK
HKNKVQLMGS GTIFREVIAA AEMLENEWDV AADIWAAPSF NLLRRDGVET TRWNTMHPTE
KPKVSYCEAT LSGAKGPFIA ATDYIRDYPN RIREYVPGEF YVLGTDGFGR SDTREQLRKF
FEVNRYYVVV ESLKALADAG SIKPEVVQKA IEKYGIDSEK TYPVHA
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