| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0994 |
|---|
| Symbol | |
|---|
| ID | 3762172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1069916 |
|---|
| End bp | 1071289 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637785715 |
|---|
| Product | DNA repair protein RadA |
|---|
| Protein accession | YP_391263 |
|---|
| Protein GI | 78485338 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1066] Predicted ATP-dependent serine protease |
|---|
| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAA AAATAAAAAT GGCGTATGTC TGTACGGAGT GTGGTGCGGA TTTTGCCCAA
TGGCAAGGGC AGTGTAATGC GTGCCATGAA TGGAACACAT TAAAAGAATT TAAAGTCTCT
GCGTCCAAGT CAAAGTCCAG TGTCTCTCAT GCGACAGGGA GTTACGCAGG CGCGGTTGAA
AGCACCGTCT TATCGGTCAA CGAAGTGGAA TTGTCCGAAG TGCCTCGCAT GGATTCCAGT
TTGTCTGAAC TTGATCGCGT GTTGGGAGGC GGGATTGTCC CTGGCTCTGT GGTGTTGATC
GGTGGCGATC CTGGGGTTGG GAAATCGTCT TTGTTGCTGC AAGTCTCTTG TCAGTTGAGT
CAGTCCCAAA AAGTGCTTTA TGTCACTGGG GAAGAGTCGC TGCAACAGGT GGCCATGCGT
GCCAAACGTA TGGGGTTGCC AGAAGATAAA CTGCGACTTT TGACGGAAAC CGATGTCGAG
TCGGTTGTGA TGGCGGCGCA AAATGAAAAA CCCGCCATTA TGGTGGTGGA CTCTATCCAA
ACCATGCAGC TGTCAGAAGT TTCCAGTGCG GCGGGTGGTG TGTCTCAAGT GCGTGAATCG
GCAGCCTTCT TAACACGCTA TGCAAAGCAA AACCAAGTGA TGATCTTTCT TGTTGGGCAT
GTGACCAAGT CGGGAGAAGT GGCAGGGCCG CGTGTATTGG AGCACATTGT TGATACGGTG
CTGTTCCTGG AAGGACAGTC TGACAGTCGT TTCCGAACGC TTCGTGCCAT TAAGAATCGT
TTTGGCGCTG TGAATGAGCT GGGCGTTTTC GCCATGACTG ACAAAGGCAT GAAACAAATT
AAAAACCCAT CGGCCATATT CTTATCTCGA GCGGATGAAC CTTCTCCTGG CTCGGTGGTT
ATGGTGTTAT GGGAAGGATC TCGTCCATTG TTGGTCGAGA TACAAGCCTT GGTGGATGAT
TCGCCTTATG GTGCACCGAA GCGCGTGACG GTCGGTCTGG AATATAACCG GATGGCGATG
TTGCTAGCGG TATTACACCG TCATGCAGGG GTGCAGGCGG GCGATCAGGA TGTCTATGTC
AATGTCGTCG GCGGGGTAAA AGTCACTGAA ACCAGTGCAG ACTTGGCGGT CTTAAGCGCC
ATCGTGTCCA GTTTGAAAAA CAAAACGCTT TCTCAGGATT TGATTATTTT TGGTGAAGTT
GGGTTGTCAG GTGAAATTCG CCCGGTATCC AGTGGACAAG AGCGCATTTT CGAAGCGGCT
AAGCATGGTT TTAAACGAGC CATTGTACCG AATGGCAACA TTCCGAAAGG CGGGGTGGCT
GGCATGGAGG TGCAAGGCGT TTCAACCTTG CAACAAGCAT TGGACTTAAT TTGA
|
|---|
| Protein sequence | MAKKIKMAYV CTECGADFAQ WQGQCNACHE WNTLKEFKVS ASKSKSSVSH ATGSYAGAVE
STVLSVNEVE LSEVPRMDSS LSELDRVLGG GIVPGSVVLI GGDPGVGKSS LLLQVSCQLS
QSQKVLYVTG EESLQQVAMR AKRMGLPEDK LRLLTETDVE SVVMAAQNEK PAIMVVDSIQ
TMQLSEVSSA AGGVSQVRES AAFLTRYAKQ NQVMIFLVGH VTKSGEVAGP RVLEHIVDTV
LFLEGQSDSR FRTLRAIKNR FGAVNELGVF AMTDKGMKQI KNPSAIFLSR ADEPSPGSVV
MVLWEGSRPL LVEIQALVDD SPYGAPKRVT VGLEYNRMAM LLAVLHRHAG VQAGDQDVYV
NVVGGVKVTE TSADLAVLSA IVSSLKNKTL SQDLIIFGEV GLSGEIRPVS SGQERIFEAA
KHGFKRAIVP NGNIPKGGVA GMEVQGVSTL QQALDLI
|
|---|
| |