Gene Tcr_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0977 
Symbol 
ID3761558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1055960 
End bp1056949 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID637785698 
ProductK+-dependent Na+/Ca+ exchanger related-protein 
Protein accessionYP_391246 
Protein GI78485321 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0530] Ca2+/Na+ antiporter 
TIGRFAM ID[TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCA GCCTCATTCT ACCACTAATT GTTTTATTCG TAGGTTTAGC CCTCTTGGTC 
TGGAGCTCTG ATATTTTTAT TGAAGGCGCC GCCAGCACTG CGATTCACAT GAATATTTCC 
CCCCTCATAA TTGGGGTTGT TGTCTTAGGG TTTGGAACGT CTGCCCCGGA AATCTTAGTC 
GCCATACTGG CCTCTATCGA TAACAGCCCT GGATTAGCCA TTGGTAATGT CGTGGGGTCA 
AACATTGCGA ATATCGGCTT AGTGCTCGGT GTCACGGCTA TTATCTCCCC TGTTGTCATC 
AAATCGTCAC TTCTTAAACG CGAATTTCCT ATTTTACTCG GTATCTCTTT GGTGGGTATT 
TTGCTGATGC TGGATAAAGA TCTGGATATA ACAGACGGCA TCATTCTACT GGCGTTGTTG 
TTAATTGTGA TGACTTGGAT GATTCGTGCA AATAAAAACA TCAGCCCAAG TGATCCCTTA 
GCTGAAGAAA CCATTGAAGA GATTGAAGAC CTTCCCAAAC TGAGCAACCA AAAAGCGTTA 
GTCTTTCTTA TCTTAGGGCT GGTCGTGTTA ATGATCAGTG CCAAAATGAT GGTTTGGGGT 
GCGGTCGAAA TTGCGGAATT CTTTGATGTA CCGGAAATGA TTATTGGTTT GACCATTGTT 
GCGATAGGGA CAAGCTTACC CGAGCTTGCA GCAGCCATTA CAGCAGCTAA AAAAGGCGAA 
GCTGATCTAA TGATCGGGAA TATTTTAGGC TCCAACCTCT TTAATTTATT AGCCGTTATG 
TCAATGCCTG CATTGATTGC ACCTTCGGTT ATCGACAATG CAACCTTGTT ACTCGATTAC 
CCTATTATGC TCGCCTTAAC ACTTGCCATG CTACTGGTTG CTTTGCCGCG AAAAGGCAAA 
GCGGTTATCA CCAAAACAGA AGGTTACATC CTACTCATCA GCTTCATTGG TTATATGTTA 
TTACTCTACT TCAGAAGCAC TGCCGGCTAA
 
Protein sequence
MTSSLILPLI VLFVGLALLV WSSDIFIEGA ASTAIHMNIS PLIIGVVVLG FGTSAPEILV 
AILASIDNSP GLAIGNVVGS NIANIGLVLG VTAIISPVVI KSSLLKREFP ILLGISLVGI 
LLMLDKDLDI TDGIILLALL LIVMTWMIRA NKNISPSDPL AEETIEEIED LPKLSNQKAL 
VFLILGLVVL MISAKMMVWG AVEIAEFFDV PEMIIGLTIV AIGTSLPELA AAITAAKKGE 
ADLMIGNILG SNLFNLLAVM SMPALIAPSV IDNATLLLDY PIMLALTLAM LLVALPRKGK 
AVITKTEGYI LLISFIGYML LLYFRSTAG