Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0973 |
Symbol | |
ID | 3761554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1053420 |
End bp | 1054142 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785694 |
Product | ABC transporter related |
Protein accession | YP_391242 |
Protein GI | 78485317 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.156124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCATT TCTATGCTCG AAAAATCGCC AAAAGCTATA AGCGTCGGCA TGTTGTCAGC TCCGTCGATC TAGACGTTGA AAGCGGTCAA GTAGTTGGCC TACTTGGACC GAATGGTGCA GGGAAAACAA CCACTTTTTA CATGATGACA GGATTGGTTC CGAATGATGC GGGAGAAATC TTTCTGGACG ACCGCGAAAT TAGTAATCTT TCCATCGACC AAAGAGCAAA ACTGGGCATC GGCTATCTAC CTCAAGAAGC GTCTGTATTT CGAAAACTGA CGGTTGAACA GAACATCATG GCCATTCTTG AAATGCGCCC CGAATTGACG CTAGATCAAA AAAAGCAACA CTATGAAGAG TTGATTGACG ACCTACAGAT CGGCCATATC ACCACACAGC TTGGCCAAGC ATTATCTGGT GGAGAAAGAC GTCGTGTTGA AATAGCACGC GCCTTAGCAA TGGAACCTAA TTTCATCTTA TTAGATGAAC CTTTCGCAGG GGTTGATCCC ATTTCGGTTA AAGACATTCA GAACATTATT TTGCATTTAA AGATGAAAGG CATAGGCGTT TTAATTACCG ACCATAATGT TCGTGAAACA CTTGGGGTAT GTGACCAGGC TTACATTCTT CATGCCGGAA CAATCCTGGC ACAGGGCGCA CCACATGAGA TTTTAAGCAA TGCCGACGTT AAGCGCGTTT ATCTCGGTGA AAACTTCCAA TAA
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Protein sequence | MAHFYARKIA KSYKRRHVVS SVDLDVESGQ VVGLLGPNGA GKTTTFYMMT GLVPNDAGEI FLDDREISNL SIDQRAKLGI GYLPQEASVF RKLTVEQNIM AILEMRPELT LDQKKQHYEE LIDDLQIGHI TTQLGQALSG GERRRVEIAR ALAMEPNFIL LDEPFAGVDP ISVKDIQNII LHLKMKGIGV LITDHNVRET LGVCDQAYIL HAGTILAQGA PHEILSNADV KRVYLGENFQ
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