Gene Tcr_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0973 
Symbol 
ID3761554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1053420 
End bp1054142 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content44% 
IMG OID637785694 
ProductABC transporter related 
Protein accessionYP_391242 
Protein GI78485317 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.156124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCATT TCTATGCTCG AAAAATCGCC AAAAGCTATA AGCGTCGGCA TGTTGTCAGC 
TCCGTCGATC TAGACGTTGA AAGCGGTCAA GTAGTTGGCC TACTTGGACC GAATGGTGCA
GGGAAAACAA CCACTTTTTA CATGATGACA GGATTGGTTC CGAATGATGC GGGAGAAATC
TTTCTGGACG ACCGCGAAAT TAGTAATCTT TCCATCGACC AAAGAGCAAA ACTGGGCATC
GGCTATCTAC CTCAAGAAGC GTCTGTATTT CGAAAACTGA CGGTTGAACA GAACATCATG
GCCATTCTTG AAATGCGCCC CGAATTGACG CTAGATCAAA AAAAGCAACA CTATGAAGAG
TTGATTGACG ACCTACAGAT CGGCCATATC ACCACACAGC TTGGCCAAGC ATTATCTGGT
GGAGAAAGAC GTCGTGTTGA AATAGCACGC GCCTTAGCAA TGGAACCTAA TTTCATCTTA
TTAGATGAAC CTTTCGCAGG GGTTGATCCC ATTTCGGTTA AAGACATTCA GAACATTATT
TTGCATTTAA AGATGAAAGG CATAGGCGTT TTAATTACCG ACCATAATGT TCGTGAAACA
CTTGGGGTAT GTGACCAGGC TTACATTCTT CATGCCGGAA CAATCCTGGC ACAGGGCGCA
CCACATGAGA TTTTAAGCAA TGCCGACGTT AAGCGCGTTT ATCTCGGTGA AAACTTCCAA
TAA
 
Protein sequence
MAHFYARKIA KSYKRRHVVS SVDLDVESGQ VVGLLGPNGA GKTTTFYMMT GLVPNDAGEI 
FLDDREISNL SIDQRAKLGI GYLPQEASVF RKLTVEQNIM AILEMRPELT LDQKKQHYEE
LIDDLQIGHI TTQLGQALSG GERRRVEIAR ALAMEPNFIL LDEPFAGVDP ISVKDIQNII
LHLKMKGIGV LITDHNVRET LGVCDQAYIL HAGTILAQGA PHEILSNADV KRVYLGENFQ