Gene Tcr_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0940 
Symbol 
ID3761863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1015115 
End bp1015738 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content42% 
IMG OID637785661 
Producthypothetical protein 
Protein accessionYP_391209 
Protein GI78485284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00000242872 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTTC TTAAAACGCC GCTTCGTCAA ACTTTAACGG CCATTGCCTT TGTGACAGGT 
GTGTCTGTCA TGTCTCAAGT TCAAGCCGAA CCAACGGCTC CAGCACCACA CAGTGGTGGT 
ATGCAGCAGA TGCCGAAAAT GACGCCGGAA CAACAATCCA TGATGATGGA ACTGCAAAAA 
ACGCAGCAAC AGTTACAACA AACGCAACAA GAATTACAAA AAATTCAGCA GCAGGTTTAC 
AAAGAATCTC CAGAGCTTCA GAAGCAACGA GATGCTTTGC AAGCTAAAGT GTCTGAGAAA 
ATGTCCCATG GTGGGTATGA CGCAGACAAA GAACTGAAAA AAATGAATGC CTTGGTTGAT 
AAATACCAAA ACAGTGAAGA AAAGCCTTCG CAATCTGAAA TTCAAGAGTT TCAAGCGAGC 
CAGAAAGAAT TTCAGGCTCG TCAGCAAAAA GTTTTTCAAG ACCCTGAAGT TCGTAAAATG 
GCCGAGAACT TACAACAAAA CGTGAAAGCA AAAATTGAGG CCACCGGTCC AAAAGGGAAA 
TCTTTGATTG TTCGTTTAGA AAATCAAATG AAAAAACTTC AGGACTTACG TCAAAAAGCA 
ATGGCGATGA TGCGCAGTCA GTAG
 
Protein sequence
MYFLKTPLRQ TLTAIAFVTG VSVMSQVQAE PTAPAPHSGG MQQMPKMTPE QQSMMMELQK 
TQQQLQQTQQ ELQKIQQQVY KESPELQKQR DALQAKVSEK MSHGGYDADK ELKKMNALVD 
KYQNSEEKPS QSEIQEFQAS QKEFQARQQK VFQDPEVRKM AENLQQNVKA KIEATGPKGK 
SLIVRLENQM KKLQDLRQKA MAMMRSQ