| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0925 |
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| Symbol | |
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| ID | 3761848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1002461 |
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| End bp | 1004101 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785647 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_391195 |
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| Protein GI | 78485270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC ACACTTTTTT TTCCTCTGTC TTCTCTCTAA CAATGATTGG TGCTTTGCTA
TCAGGGTGCA GTCAGTTTCC GCTCCATAAC AAAAACCATG GATACACAAA CACTGATGAG
GTTAATTTTT CTAAGCTTCC CGTGACGGAC CCTGTCATCG CAGATACTGA AGAGACCGAC
GCTTTTGAAA AAACCATTCA AAACTCGACC AAGCGTTTCC TGGCATTAAA AACCAACGAC
GATCTATCCA ATCAATTGGA TCAAGCGTTA ATCCTATTAA ATGATAAGCC AACGTATGAC
GACTTATGGC AGGAACTCAG TGAACATTTA TTTTTAGCGC CGGCGAACAG TGAGCATTTT
GAAGAATATC AAAACTATTA CGAGAATAAA AAAGCTTACT TGAAACGCGT TTCGGTACGA
GCGAAACCTT ACCTTTACTT CATTTTAAAT GAAGTAAGTC GCCGACACAT GCCGTATGAA
ATTGCTTTAT TGCCCGTGGT TGAAAGTGGC TATTACCCTT ACGCTCGCTC TTATGTCAAT
GCCTCTGGTT TATGGCAGTT TATGCCGGCG ACAGGCTATA TGTTCGGCTT ACATCGTAAC
TGGTGGTATG ATGGACGCCA GGATGTGTAT AAAAGCACAC TCGCGGCGCT CGACTACCTT
CAAGCACTGT ATAAGCAGAA TGATTACGAC TGGCTATTGG CGCTTGCGTC CTACAACGGC
GGGTATGGCA ACGTATTAAA AGCTCGGAAG CAATATTTAA GAAAACACCC AAACGGTGAA
CCTTCCTTCT GGAATATTCG AGCTTATTTG CCGAAAGAAA CACAACATTA CGTTCCGCAA
CTCCTTGCGA TATCAAACTT AATCATTCAT CGTGAAGATT ATGACATTGA CCTTGAACCC
GTACCTAATG CGCCTTTTTT CAAGCGCGTG GAAATTTCGA ACCAGATCAG CCTGCCTAAA
GTGGCGAAAT CCACTCAAAC GTCCCAGGCC ATTTTAAAAG TGCTTAACCC AGGGTATCTT
AGACTGGCAA CGCCTCCTAC TGGCTCTCAT TCCGTCCTGC TGCCTATTGA AGTAGCGGAT
GCCTTTGAAG TCGATTACCA GCAAAAACCT CATTTCTATG AGGTCAACTG GATGAGACAT
AAAATTCGTT CAGGAGAAAG CTTAAGCGTC ATTGCGGCTA AATATAATAC GTCCAGTCGT
GAAATTAAAA AACTGAACAA TATGAAAAAC AGTTTTTTGA GAGCCGGCAA AACACTTTTG
ATTCCATTGC CACAAAGCCA ACAGCTGGCC CAAACCCCAT TAAAAAAATC AACGAACTAT
AATGGTAAAA AACACATCCA CAAAGTTCAA TCCGGGGAAA GCCTATGGAC GATTGCGCGA
TATTACAACA CCTCGCCGCG TAAACTGTGT GAGTGGAACC GGATCAGCAT TCGTGAACCT
ATTCGAAAAG GCCAGAAGCT CGTTATCCAG TCAGATCGTT ACGGTCGAAA AGTCTCACAC
ACCTTAAAAG AAGGTGAAAG CTTGTGGGTT GTGGCTAAAA AATATCGCGT CACTACGCAA
GAATTATGTA ACTGGAATGG GATTAAAAAA TCGGCTGTTT TACACCCAGG CGTGAAAATA
AAAGTATGGA TAAAAAGTTA G
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| Protein sequence | MTKHTFFSSV FSLTMIGALL SGCSQFPLHN KNHGYTNTDE VNFSKLPVTD PVIADTEETD
AFEKTIQNST KRFLALKTND DLSNQLDQAL ILLNDKPTYD DLWQELSEHL FLAPANSEHF
EEYQNYYENK KAYLKRVSVR AKPYLYFILN EVSRRHMPYE IALLPVVESG YYPYARSYVN
ASGLWQFMPA TGYMFGLHRN WWYDGRQDVY KSTLAALDYL QALYKQNDYD WLLALASYNG
GYGNVLKARK QYLRKHPNGE PSFWNIRAYL PKETQHYVPQ LLAISNLIIH REDYDIDLEP
VPNAPFFKRV EISNQISLPK VAKSTQTSQA ILKVLNPGYL RLATPPTGSH SVLLPIEVAD
AFEVDYQQKP HFYEVNWMRH KIRSGESLSV IAAKYNTSSR EIKKLNNMKN SFLRAGKTLL
IPLPQSQQLA QTPLKKSTNY NGKKHIHKVQ SGESLWTIAR YYNTSPRKLC EWNRISIREP
IRKGQKLVIQ SDRYGRKVSH TLKEGESLWV VAKKYRVTTQ ELCNWNGIKK SAVLHPGVKI
KVWIKS
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