Gene Tcr_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0920 
Symbol 
ID3760465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp995748 
End bp996254 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content44% 
IMG OID637785642 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_391190 
Protein GI78485265 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG TCACTTTCCA AACAAATATG GGCGATATCA CCATCGAAGT GGATCATGAA 
AATGCACCGA TTGGTGCTGA AAACTTTGTT CACTATGCAA TGGATGGCTT TTACAACGGA
ACCATTTTTC ATCGAATCAT TCCAGGATTT ATGGTGCAAG GCGGCGGTAT GCTACCTGGC
ATGGAAGAAA AACCGTCAGG GGATCCGATT GAAAATGAAG CCGACAATGG TCTGAAAAAC
GTTCGTGGCG CCTTGTCTTA TGCGCGAACA ATGGATCCGC ACTCCGCAAC CACACAGTTT
TTTATGAACC TAGTCGACAA TGACTTCTTA AACCATACTT CAAAAGACAT GAATGGATGG
GGATACGCCG TATTTGGTCG CATCATTGAC GGGTTGGACG TGATTGATAA AATGGCCCAA
GTCGAAACCA CGTCTCGTCG TGGTCATCAA GATGTTCCGA TTGAAGATAT CATCATCGAA
AAAACCATCG TTAAAGAAGC GGATTAA
 
Protein sequence
MTQVTFQTNM GDITIEVDHE NAPIGAENFV HYAMDGFYNG TIFHRIIPGF MVQGGGMLPG 
MEEKPSGDPI ENEADNGLKN VRGALSYART MDPHSATTQF FMNLVDNDFL NHTSKDMNGW
GYAVFGRIID GLDVIDKMAQ VETTSRRGHQ DVPIEDIIIE KTIVKEAD