| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0906 |
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| Symbol | |
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| ID | 3760451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 983880 |
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| End bp | 985343 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785628 |
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| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
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| Protein accession | YP_391176 |
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| Protein GI | 78485251 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000910984 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAG ACAATACTGA AAACCATTCA CCTGATCATC CGATTGTTTG GATTGTAGAC
GATGATGCGT CTATCCGATG GGTTTTAAAT GAATCGCTAG AAGATCGTCC TTATCAAGTA
CGTTCGTTTG ATTCAGCGTT TGAAGCGCTG CGTCTTTTAC CAACGGAACG TCCGACGGTC
GTGATTTCTG ATGTTCGTAT GCCAGGCATG GATGGTCTTG AATTTATGGA AGCCATTCAT
GAACATGATA AAGACATTCC GGTGATTATT ATGACGGCGC ATGCCGATTT GGATACGGCT
GTGAAATCGT TTCAAAGTCG CGCTTTTGAG TACCTGCCTA AGCCGTTTGA AATTGATGAT
GCGCTGATGA TTATCGATCG GGCGGTAAAA CGCCAATTGT CCGGAGGCAA GCGCGTTCGA
AAGGTAAAGC AAACCAAACA ACCGTTGAAC ATTATTGGTT CAGCACCCGC GATGCAGGAA
GTTTTCCGAA TTCTAGGGCG CGTTTCTCAA TTGGATGTCA CGGTTCTGAT TACCGGTGAA
ACGGGAACGG GGAAGGAGTT AGTTGCCAGA GCGCTCTATG AATTAAGCAG CCGTTCCAAT
CGGCCTTTCG TTGCCATCAA CACCGCGGCC ATTCCAAGAG ATTTGCTTGA ATCTGAGCTG
TTTGGTCATG AAAAGGGTGC GTTTACAGGG GCCCATACCC AGCGTGTCGG GCGTTTTGAA
GAAGCGAATG GGGGCACTTT ATTTTTAGAT GAAATCGGTG ATATGCCGGT GGATTTGCAG
ACACGTTTAT TGCGAGTGTT GAATGATGGT ACTTTCTATC GAGTGGGGGG CAAAACCCCA
ATTAAAACCG ATGTGAGAAT CGTGGCGGCC ACGCACCAGA ATATGCAAGA ATTGGTGAAA
CAAGGCCGTT TCCGTGAAGA TTTACTCTAT CGCTTGAATG TGATTCGTAT TAAAGTGCCT
GCATTACGTG AAAGACGTGA AGACATTTTG CCTATTGTTC GTTATTATCT GACGGAAGAA
GCCAAATCGT ATGGTTTGGA AGAAAAACGA TTAAGCAAAG CGGTTGAGAA GTATTTAGTC
GAACTGCCTT GGCCAGGAAA CGTCCGCCAA ATACGCAGTT TATGTACTTG GTTAACTATT
ATGGCGCCGG ATAAAACAGT TCATATGGAA GATCTTCCTT TGGAATTACA AAACGGTTCT
GAGCCTTTAG CTATGTCTGC TGGCGGTGCC AGTGCTTCAG AAGATTCCGA TGACTGGGAA
ACTCCTTTAC GGTCTTGGGC GAAGCATTTC TTAAATGCCG GACGTACAGA ATTGCATACC
GAAGCTGAGA AGATTTTTGA AAAAGCGTTG ATTGAAGTGG CGATGAAACA CAGCATGAAT
CACCGTCAAA AAGCGGCTCA GTTATTGGGA TGGGGCCGAA ATACTTTGAC GCGGAAAACC
CAAGCTCTCG GGTTGGATGA TTAG
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| Protein sequence | MQQDNTENHS PDHPIVWIVD DDASIRWVLN ESLEDRPYQV RSFDSAFEAL RLLPTERPTV
VISDVRMPGM DGLEFMEAIH EHDKDIPVII MTAHADLDTA VKSFQSRAFE YLPKPFEIDD
ALMIIDRAVK RQLSGGKRVR KVKQTKQPLN IIGSAPAMQE VFRILGRVSQ LDVTVLITGE
TGTGKELVAR ALYELSSRSN RPFVAINTAA IPRDLLESEL FGHEKGAFTG AHTQRVGRFE
EANGGTLFLD EIGDMPVDLQ TRLLRVLNDG TFYRVGGKTP IKTDVRIVAA THQNMQELVK
QGRFREDLLY RLNVIRIKVP ALRERREDIL PIVRYYLTEE AKSYGLEEKR LSKAVEKYLV
ELPWPGNVRQ IRSLCTWLTI MAPDKTVHME DLPLELQNGS EPLAMSAGGA SASEDSDDWE
TPLRSWAKHF LNAGRTELHT EAEKIFEKAL IEVAMKHSMN HRQKAAQLLG WGRNTLTRKT
QALGLDD
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