Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0897 |
Symbol | |
ID | 3761368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 975858 |
End bp | 976883 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785617 |
Product | hypothetical protein |
Protein accession | YP_391167 |
Protein GI | 78485242 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02794] TolA protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000812436 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGCAT TCATTATTCG TCACCCTGTT TCAATGGTAT TGGCCATTGT GTTACATAGT TTTATTGCGA TCGGTTTGGT TTACAGTTCC TTTCAAGAAG AGGATGTTTT AAAAGTAAAG CTAAACGGAG AGACTTCTGA CGCTGAACAA ATGCCCGTTA AACAAATACA ACCAATGAAA ACGTTTACGG TCGATTCCTC GTTGGTTAAG CAGCAATTGG CAAAAATTAA GCAAGAAGAA GCGGAAAAGA TTGAAGCTCA AAAAAGATTA AAGCGCCAGT CTGAAGCGGA AAAACGTCAT TTAGCTGAGT TGAAACGAAA GCAGTTGGAA GAGAAAAAGA AAGCCGAAGC GGAACGTCGT AAAGCATTGG CTGAACAACG CAAAGCGGAT GAAGCCAAAC GATTAGCGGA AATTGAACGT CAAAAAGTGT TGGCTGAACA AAAACGGGCA CAAGAAGCGA AACGTTCCGC AGAGAAGGCG AAAAAAGAAG CTTTATTGGC TGAAAAGAAA CGTGAAGAAG CGAAGCAGTT AGTGGCGGAA GCACAGCAAA AACGCCAGCA AGAAGAAGCC AAGAAAAAAG CGCTTGAAGA ACAAATTCAA AAACATAATG CTGAGAAAAA ACGTTTAGAA GCCGAAGCGC TGCAAGCCAA ATTACGTCGA GAGCAGTTAC AACAAGAAGC GGCTTTACAA AGACAGCTTG AAGAAGAAGA GGCGAAAAAA CGTCAAGCCG CGAAGCAGAA AGAAATGTTG AGTTTACGTG AAACCTATAT TTCCTCCATT GCTGCCAGTG TGAAAGATAA CTGGCGTACG GCCGCCAAAG TGTCGGAAAA AGCAGAATGT GTGGTGTCGA TTACACAAAC GCCGAAAGGC ATGATCAGCA GCGTTAAAGT AGAGAAGTGT AATAAATTCG CTAACGAACA GTTTAAAAAG GACGCAGAAA AAGCGGTTTA TCGAGCAGAA CCGCTACCCC AGCCTCCTAT TAAAGAGCTG TTTGAACGAA ATATTAAATT TATCTTTAAT CCTTAA
|
Protein sequence | MFAFIIRHPV SMVLAIVLHS FIAIGLVYSS FQEEDVLKVK LNGETSDAEQ MPVKQIQPMK TFTVDSSLVK QQLAKIKQEE AEKIEAQKRL KRQSEAEKRH LAELKRKQLE EKKKAEAERR KALAEQRKAD EAKRLAEIER QKVLAEQKRA QEAKRSAEKA KKEALLAEKK REEAKQLVAE AQQKRQQEEA KKKALEEQIQ KHNAEKKRLE AEALQAKLRR EQLQQEAALQ RQLEEEEAKK RQAAKQKEML SLRETYISSI AASVKDNWRT AAKVSEKAEC VVSITQTPKG MISSVKVEKC NKFANEQFKK DAEKAVYRAE PLPQPPIKEL FERNIKFIFN P
|
| |