Gene Tcr_0893 details

Gene Information

• Locus tag: Tcr_0893
• ID: 3761364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 972867
• End bp: 973469
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637785613
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_391163
• Protein GI: 78485238
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.000557116
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGGAT TTTTATCGGG CACATTACAT GCAAAGTTAC CCCCACAAAT TTTGATTAAC 
GTCAACGGAG TGGGGTATGA AGTGGAAGCC CCGATGTCGA CATTTTACGC CATCGGCGAA 
GTGGGCGATG AGGTGATGCT GTTAACACAT ATGCATGTGC GTGAAGATGC GATGTTGTTG 
TTTGGGTTTG CCTCGGAGCT TGAAAGAAGC TTGTTTAAAG AATTAATTAA AGTGAATGGT 
ATTGGTGCCA AAATGGCGAT TGGCATTTTG TCTGCCATGT CGGTCAATGA TTTTGTTGGG 
TTGGTTGACG TTGGCGATGC CCCCGCGCTG ACAAAAATTC CAGGGGTGGG TAAGAAAACC 
GCGGAACGTT TGGTCATTGA AATGCGGGAT CGTTTGAAAG GTTGGGGGAA CGGGGCGAGT 
TCAAACGTTT CGTCAAAAAC AATGGTGAGC TCTGCGCCAC ATAATCAAAA GGCTTCAGCT 
GTTGAGGCGT TGATTTCATT AGGGTATAAA ACAGCTCAAG CAGATAAAAT GGTACAAGCC 
GTTGAGTCCG GTTTAAGTTT GGAAGAGACG ATTAAAAAAG CATTGCAGTC CGTTAAGCTC 
TAA 

 

Protein sequence

MIGFLSGTLH AKLPPQILIN VNGVGYEVEA PMSTFYAIGE VGDEVMLLTH MHVREDAMLL 
FGFASELERS LFKELIKVNG IGAKMAIGIL SAMSVNDFVG LVDVGDAPAL TKIPGVGKKT 
AERLVIEMRD RLKGWGNGAS SNVSSKTMVS SAPHNQKASA VEALISLGYK TAQADKMVQA 
VESGLSLEET IKKALQSVKL