Gene Tcr_0880 details

Gene Information

• Locus tag: Tcr_0880
• ID: 3760440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 960903
• End bp: 961379
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637785600
• Product: GreA/GreB family elongation factor
• Protein accession: YP_391150
• Protein GI: 78485225
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAGAC ATCCTATGAC AAAAGAAGGT GCAGATGCAC TTCAAGAAGA ATTACAACAC 
TTAAAGAAAG TTGAGCGTCC TGCTGTTTCA AATGCCATTG CCGAAGCAAG AGAGCATGGT 
GACTTAAAAG AAAATGCAGA ATATCATGCG GCCAGAGAAC AGCAAGGCCT GATGGAAGCG 
CGTATCAAAC AAATAGAATC TTTGTTAGGC AGTGTTCAGA TCATTGATGT AACTAAATTG 
AACCCAAATG GAAAGGTCGT ATTTGGTTCA ACGGTAACCA TTCTGAATGT CGACACAGAA 
GAAGAGGTAA CTTATAAAAT TGTTGGGGAA GAGGAAGCGG ATATTAAACA CAATAAAATT 
TCAGTGAATT CCCCAATTGC ACGTGCTTTG ATTGCCAAAG AAGAAGGTGA GGAAATTACG 
GTTAAAGCGC CAAGTGGTAA TATTGAATAC GAGATTGTTG AAATTCAATA TGTTTAA 

 

Protein sequence

MQRHPMTKEG ADALQEELQH LKKVERPAVS NAIAEAREHG DLKENAEYHA AREQQGLMEA 
RIKQIESLLG SVQIIDVTKL NPNGKVVFGS TVTILNVDTE EEVTYKIVGE EEADIKHNKI 
SVNSPIARAL IAKEEGEEIT VKAPSGNIEY EIVEIQYV