Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0793 |
Symbol | |
ID | 3760407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 865706 |
End bp | 866953 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637785511 |
Product | peptidase S13, D-Ala-D-Ala carboxypeptidase C |
Protein accession | YP_391063 |
Protein GI | 78485138 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.979643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGACGAC TGCTGTATCA ATGGAGTGTT GGCGCTGGGC TTTTGCTGGG AAGTTTTCTC TTGCATGCCG CACCGGCTTC CGTTTCTTTA AAGGAAGCGT TGAGTCAGCT CCATGAAACA GGGGTGTTGA TGTTGAATGC ACAGCAGGAA CCCGTCATTG AAAAAGACGC TTCCAAGCTC AGAGTGCCAG CCTCCACCAC AAAATTGGTG ACGGCTTATT TAGCGTTGAA ACATTGGGGG GCGGATTATC GGTTTAAAAC CGATTTTTAT ATCACTCGAA CGACTCATGG CACCTCGTCG CTTTGGGTAA AAGGTTACGG TGATCCTTTC CTCGTGTCTG AAGAAATTCA AAAACTGGCT GAAAATTTAG CGTATCGATT GAAAGCATCG GGAATCAAAA CGGTTGATGA AATCATTTTG GATACCGGGT ATTTTGAGAC CAATGTCGTG CTTCCCGGTC GATCGAACAC GGATAATCCT TACGATGCGA TTCCTGGAGC GTTGGCCGCC AATTTTAATA CGCTTTATTT AAAAAAAGTG CGCGGTGCAA TTGTATCTGC TGAGCCTCAA ACCCCATTAA CACCCCTTGC GGTGGCGTTG GGAAAACACA CCAATTTAAA GCATGGGCGT TTTAATCTAG GGGGTAATGC CAAAACTGGT GAGCGGTATT TTGCAGAGCT ATTATCTGTC TTCTTGCAGC GTTCAGGTAT TGCGGTGGCG CAAAATGTGA AATGGCGCAG TCTGAATCAT CAACAGGATT TGAAAGAATC GCCGCCGTTT TATCGGCATC TGAACAGCTT AACGTTGGCT GAAATCATTC AGCCCATGAT GCGTTATTCG ACCAATTTTA TTGCAAACCA GTTGGCGCTG AAATTGAGTG CCGAGAGATT AGGTGTGCCT GCATCACCAG AGAAAGTCAA GCAGATGATG CGGACGGATT TAACACATTA TTTGGGATGG CAGGATTTTT ATCTGGAAGA CGGCGCCGGA CTGTCTCATC AGAATCGACT CAGCCCGCAG CAGTTGGTAG TCTTATTGGA AGCTTTTCGG CCTTGGAAAT CGTTGTTGCC GGAAATCGAA GATCAAATTT TTGCTAAATC GGGAACGTTA ATCGGCGTCA GTACTTTGGC TGGCTATATC TATCAGCAAC AGCATTGGCT TCCGTTTGCG TTGATGATTA ATCAGCCAGT GCCCTTTCAT TACAAAAACC AGTTGGCGTT ACAGCTCAAG CAACAGCTTG AAAAATGA
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Protein sequence | MRRLLYQWSV GAGLLLGSFL LHAAPASVSL KEALSQLHET GVLMLNAQQE PVIEKDASKL RVPASTTKLV TAYLALKHWG ADYRFKTDFY ITRTTHGTSS LWVKGYGDPF LVSEEIQKLA ENLAYRLKAS GIKTVDEIIL DTGYFETNVV LPGRSNTDNP YDAIPGALAA NFNTLYLKKV RGAIVSAEPQ TPLTPLAVAL GKHTNLKHGR FNLGGNAKTG ERYFAELLSV FLQRSGIAVA QNVKWRSLNH QQDLKESPPF YRHLNSLTLA EIIQPMMRYS TNFIANQLAL KLSAERLGVP ASPEKVKQMM RTDLTHYLGW QDFYLEDGAG LSHQNRLSPQ QLVVLLEAFR PWKSLLPEIE DQIFAKSGTL IGVSTLAGYI YQQQHWLPFA LMINQPVPFH YKNQLALQLK QQLEK
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