Gene Tcr_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0780 
Symbol 
ID3761704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp855128 
End bp855718 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content43% 
IMG OID637785498 
Producthypothetical protein 
Protein accessionYP_391050 
Protein GI78485125 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.263048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAT TCAACCGATT AACCCCCTTC TTTTTAGCCA CTGGCTTGAT GATCTTTTCA 
AGCTTAGCTT TATCGGCCCC GGTCAAATAT GAAATTGACA CCAAAGGGAT GCATGCGTCC 
ATCAACTTTA AAATTCAACA TTTAGGCTAT AGCTGGTTAA CAGGCCGATT TGACCAATTT 
GGCGGACACT TCACTTATGA CAAAGAAAAC GTCTCCAACA GCGAAGTGAA TGTAACCATT 
GATACCAATA GCATCAATAC CAATCATGCG GAAAGAGATA AACACTTAAG AAGCGACGAC 
TTCCTAGATG TGAAAAAATT TCCAAAAGCG ACGTTTGTCA GCAGCAGTAT TAAAAAAACT 
GGCGACAACA CCTTAGCCGT CAAAGGAAAA CTGACTTTAC ACGGCGTCAC GAAAACGATT 
GAAATCGATG CGAAAAAAGT TGGGGAAGGG AAAGATCCTT GGGGCGGTTA TCGAGCTGGA 
TTCAGCGGTA CCACGTTAAT CAAACTGGCG GATTACGGCA TCACCTATAA TCTTGGACCC 
GCTTCTGCGA ATGTCTACTT TCAGCTAAAT CTGGAAGGCG TTCGTCAATA A
 
Protein sequence
MTLFNRLTPF FLATGLMIFS SLALSAPVKY EIDTKGMHAS INFKIQHLGY SWLTGRFDQF 
GGHFTYDKEN VSNSEVNVTI DTNSINTNHA ERDKHLRSDD FLDVKKFPKA TFVSSSIKKT 
GDNTLAVKGK LTLHGVTKTI EIDAKKVGEG KDPWGGYRAG FSGTTLIKLA DYGITYNLGP 
ASANVYFQLN LEGVRQ