| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0620 |
|---|
| Symbol | |
|---|
| ID | 3760342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 694336 |
|---|
| End bp | 695448 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785333 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390890 |
|---|
| Protein GI | 78484965 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
|---|
| TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.180215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGATA AGATAAAAGA TAAAGTCGAT TTACTCGGGA TGGATCGCGC TGAATTAACG
GAATTTTTTG CCAGTATTGG TGAAAAACCC TTCCGTGCCG CTCAGGTGAT GAAGTGGATT
CATCAGTTTG GTGTCAGTGA TTTTGAAGAG ATGACCAATA TCAGTAAATC ATTGAGAGAA
AAACTGTCGA AAACAGCGCT TATTCGCACG CCTAAAATCG TGTCGGAACA ACGCTCGGCG
GACGGTACAA TTAAGTGGTT GCTAGAAGTC GATAATCACA ATTGTGTTGA AGCGGTCTTT
ATCCCTGAAA AGTCACGAGG GACCTTGTGC ATTTCTTCTC AGGTCGGATG TGCGTTGGAA
TGCAGTTTTT GTTCAACCGG ACAGCAAGGC TTTAACCGAA ATCTGGAAAA CTGGGAAATT
GTGGCTCAGA TGTGGGTCGC CAATAAAGCA TTGGGTTGCA AGCCTAAAGA AGAACGTATT
ATCTCTAATG TGGTCTTTAT GGGAATGGGA GAGCCGTTGC TAAATGTAAA GCATACGTTC
CCAACGGCTC GTATTTTGAT GGATGATAAT GCGTATGGCT TGTCTAAACG CCGTGTCACT
ATCAGTACGG CCGGGGTCGT GCCCGCTATT GACAAAATCA AAGAATCTCT AGATGTCAGC
TTGGCGATTT CACTGCATGC CCCTAATAAT GCACTGCGTG ACGAATTGGT ACCGATTAAT
AAAAAGTACC CGCTTGAAGT GTTGATGCCA GCTTTGCACC GCTACGTGGA AGGCGGCCAC
AGCAAGAAAC ACGTAACGGT TGAATACGTG ATGTTGGATC ATGTGAATGA TCGGCTGGAG
CATGCTCAAC AGTTAATTGA ACTGCTTGGG GATTTGCCTT GTAAAGTGAA TTTAATTCCG
TTTAACCCTT TTCCAAACAC GGACTATAAA CGCTCCTCGA ATAATGCGGT GCATCGCTTT
AAAGACGCCT TGATGGAAGC CGGTGTGAAT TGTACTGTTC GCCGCACGCG TGGAGATGAT
ATTGATGCGG CCTGCGGGCA ACTTGCAGGC AAAGTCAAAG ACAGAACCAA ACGAACTCTT
CAAACTGTTA ACTTGGATAA ATTACATGGC TAA
|
|---|
| Protein sequence | MSDKIKDKVD LLGMDRAELT EFFASIGEKP FRAAQVMKWI HQFGVSDFEE MTNISKSLRE
KLSKTALIRT PKIVSEQRSA DGTIKWLLEV DNHNCVEAVF IPEKSRGTLC ISSQVGCALE
CSFCSTGQQG FNRNLENWEI VAQMWVANKA LGCKPKEERI ISNVVFMGMG EPLLNVKHTF
PTARILMDDN AYGLSKRRVT ISTAGVVPAI DKIKESLDVS LAISLHAPNN ALRDELVPIN
KKYPLEVLMP ALHRYVEGGH SKKHVTVEYV MLDHVNDRLE HAQQLIELLG DLPCKVNLIP
FNPFPNTDYK RSSNNAVHRF KDALMEAGVN CTVRRTRGDD IDAACGQLAG KVKDRTKRTL
QTVNLDKLHG
|
|---|
| |