Gene Tcr_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0617 
Symbol 
ID3760339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp692919 
End bp693347 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID637785330 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_390887 
Protein GI78484962 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000000000251443 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA CCTCAAAAGG ACGTTACGCC GTTACTGCGA TGCTTGATAT CGCTTTAAAT 
CAGTCGAAAG GGCCGATCAC ACTCGCCATG ATCTCTGAAA GGCAAGATAT CTCATTGTCT 
TATCTGGAGC AGATTTTTGC TAAATTGAAG AAATCCGGTC TGGTTTTAAG TGCGCGTGGG 
CCAGGTGGAG GTTATCGCTT AAGTCGTGAT GCCAATGAGA TTTCAGTCAG CGAAGTGATT 
GGCGCTGTGA ACGAAGATCT GGAGCCTAGA AAGTGCCGTG GTAAATCCAA TTGCCAAAAT 
GGTGTTCAGT GTCTGTCGCA TGAGCTTTGG GCAGATTTGA GCGGCATGAT TAATGAATTT 
TTGGATGGCG TGACATTGCA GCAAATTATT GATCGACGTT CTTCCATACA ATCAGTGCAA 
TTTGCGTGA
 
Protein sequence
MKLTSKGRYA VTAMLDIALN QSKGPITLAM ISERQDISLS YLEQIFAKLK KSGLVLSARG 
PGGGYRLSRD ANEISVSEVI GAVNEDLEPR KCRGKSNCQN GVQCLSHELW ADLSGMINEF 
LDGVTLQQII DRRSSIQSVQ FA